| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3252 |
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| Symbol | |
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| ID | 6117571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3984297 |
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| End bp | 3985880 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634796 |
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| Product | N-acyl-D-amino-acid deacylase |
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| Protein accession | YP_001761617 |
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| Protein GI | 170727591 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.516885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGAA ATTTATATTT ATTTCTCTTA ATCTTGCTGC CCGCTTTGCA GGGATGTTCA
AGTGACAATC AATTACCGCC CCAAGCATCT TCTAAAGTTG CGAAGGTGGA TATTTTGATC
CACTCAGGTC AAGTGTTTAA CAGTAAGAGT AAGCGGTTAG AACCGATGGA TTTGGCGGTT
TGTGGCACTA TTATTTGTGA TATCTATCCA AGAGGAAGTA AGCAAATAAG GGCGAAGAGA
AGGATAGATG CCAAAGGGAA AGTGGTGAGT CCTGGCTTTA TCGATCCCCA CACTCATGCT
TTAGTCGAGC TTAAAAGCCA TGATAACAAC CATAACCTCA ACTATCTGAC CCAAGGTGTC
ACTACAGTCA TTATCGGCAA TGATGGTGAT GGTAGCGCTG ATATCGATAA GCTGAGTAAA
GAGTTATTAG CCAATGGTAT TGGCACTCAT GTCGGCATGC TGGTGGGTCA TGGCGCAGTG
CGTCAGCAAG TGATGGGTAA AGCGAAACGA ATGCCCACAA GCAAAGAGCT TAATGCAATG
GAGTCACTGG TTGAGCAAGC GATGGCCCAG GGGGCGTTGG GGTTTTCATC GGGTCTTTAT
TATGTGCCGC AAAACTACGC GAGTACAGAA GAGGTGATTG CGCTGGCGAA AGTGGCTGCT
CGATATCATG GGATCTATGA TACTCACCTT CGTGATGAGA GCAGCTTTAG TATCGGTTTA
TTACCCGCTG TTGATGAAGC GATTGCGATT GCAACGCAAG CTAATGTTCA TCTGCACCTT
GCACACTTAA AAGCACTTGG CGTCGATGTA TGGGGGCAAA GCGGTGCTGT GATAGATAAA
GTTGAACAAG CTCAATCTCA AGGGATCTCA ATTTCGGCGG ATCAATACCC CTGGCTTGCA
TCAGGTACTA AGCTAGATAA CGCCATCATG CCTAAATGGG TGATGGCGGA TTCTCAAAAC
GCTTTTTTCA AACGCTTAAA TGATCCTGCG CTCTATCAAC AGCTCAATCG TGAGATAACT
GAGAATCTGC GCCGTCGAGG CGGTGGTAAG GCCCTGCTTA TTACTGCGTT TGACGAGCAA
CAACTCATCG GGAAAACCTT AGAGCAGATC GCTATCGCAT TGGATAAATC TGAAGTGGAC
GCCGCAATTG AACTGGTGCA GCGCGGCGAG GTGAGAGTGG CTTCTTTCAA TATGTTAGAG
CAAGATCTAG CGAACTTTAT CGTTAAACCT TGGGTGGTGA CCTCATCAGA TGGCACCGAT
GGTCATCCAA GGAAATATGC TTCGTTTCCG CAAAAGTACC AAGAGTATGT AAAGCAAAAT
TCGCTGTTAA CCCTTGAAGA GTTTATCTAC CAAAGCTCCA CAAAAACAGC GGAGATATTA
GGTTTGAGTA AAAGAGGGCT GCTAGGTGTA GGCATGTTTG CTGATATTGT TATTTTAGAT
ACAGAGAACT ACCGTGCACA AGCCGATTTC TCTCACTGGG AGCGTTATTC AAAAGGGGTT
GAAGCTGTAC TTATTAATGG CCAGTTAGCG ATAGATAAAC AGCAATATAC AGGGGCGTTA
GCGGGGCAGG TATTAAAGCA GTGA
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| Protein sequence | MIRNLYLFLL ILLPALQGCS SDNQLPPQAS SKVAKVDILI HSGQVFNSKS KRLEPMDLAV
CGTIICDIYP RGSKQIRAKR RIDAKGKVVS PGFIDPHTHA LVELKSHDNN HNLNYLTQGV
TTVIIGNDGD GSADIDKLSK ELLANGIGTH VGMLVGHGAV RQQVMGKAKR MPTSKELNAM
ESLVEQAMAQ GALGFSSGLY YVPQNYASTE EVIALAKVAA RYHGIYDTHL RDESSFSIGL
LPAVDEAIAI ATQANVHLHL AHLKALGVDV WGQSGAVIDK VEQAQSQGIS ISADQYPWLA
SGTKLDNAIM PKWVMADSQN AFFKRLNDPA LYQQLNREIT ENLRRRGGGK ALLITAFDEQ
QLIGKTLEQI AIALDKSEVD AAIELVQRGE VRVASFNMLE QDLANFIVKP WVVTSSDGTD
GHPRKYASFP QKYQEYVKQN SLLTLEEFIY QSSTKTAEIL GLSKRGLLGV GMFADIVILD
TENYRAQADF SHWERYSKGV EAVLINGQLA IDKQQYTGAL AGQVLKQ
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