| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3251 |
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| Symbol | |
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| ID | 6117570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3982450 |
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| End bp | 3984159 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634795 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001761616 |
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| Protein GI | 170727590 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.836053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTA GCAAGTACCT GCTTTCAACA CAAAAAGAGA CCCCTGCTGA TGCAGAGGTG
ATCAGTCATC AATTAATGTT ACGTGCCGGC ATGATCCGTC GTAACGCTTC AGGCCTTTAC
AGCTGGTTGC CGACAGGACT TCGTGTGCTG CGCAAGATAG AAGCCATTGT CCGTGAAGAG
ATGAATAAAG CCGGTTCTGT TGAGATACTG ATGCCTATGG TTCAGCCCGC TGATCTTTGG
GTCGAAACTG GCCGCTTTGA GAAGTTTGGT CCTGAGTTGT TGCGTTTTCA GGATCGCCAC
AACCGTGATT TCGTACTTGG CCCAACTCAC GAAGAGGTGA TCACAGATAT CGTTCGTAAA
GAGGTTAACT CTTACAAACA GTTACCTTTG AACCTGTTCC AGATCCAAAC GAAGTTCCGT
GATGAGGTTC GTCCTCGTTT CGGTGTGATG CGTTCACGTG AATTCTTGAT GAAAGATGCC
TACTCTTTCC ATTTAGATCA AGAAACCATG GACGAGACCT ATGAATCTAT GTTCCAGGCT
TATAGCAATA TTCTGACTCG TCTAGGCTTA GCTTTCCGTC CTGTGATTGC AGACACTGGC
TCTATCGGCG GCAGCATGTC ACACGAGTTC CATGTACTGG CAAACAGTGG TGAAGACTTA
ATCGCTTACT CAACAGGTAG TGATTACGCT GCAAATATCG AGAAAGCTGA GTCTCCAATG
CCAACCCAGA CCCGTGGTGA AGCTACGCAA GAGATGAGCT TAGTTGATAC ACCCAATGCT
AAGACTATCG CAGAGCTTGT TGAGCAGCAC GGCGTTGCTA TCGAAAAAAC AGTTAAAACG
CTTATTGTTA AAGGCTCATC AGAAGAAGCA CCTCTTGTGG CTCTTGTTAT TCGTGGCGAC
CACGACCTTA ACGAAGTTAA AGCTGAGAAG ATCCCAGCCG TTCATGCACC TTTCGAGTTT
GCTGACGAAG CTGATATTCG TAAAGCAGTG GGTGCAGGCC CAGGCTCTAT CGGTCCAGTA
GGTCTTGAAA TCCCTGTTTA TATCGATCAT GGCGTCAGCG TGATGAGTGA TTTCGCAGCT
GGTGCAAATC AAGATAATAA GCACCTATTT GGCATTAACT GGGAGCGCAA TCTTCCACAA
GCCGAAGCAT TCGATCTACG TAACATCATC GAAGGTGAAG CCAGTCCTTG TGGTCAAGGT
ACTATCGCAC TACTTCGCGG AATCGAAGTC GGTCACATCT TCCAGTTAGG TAAGAACTAC
TCAGAAGCGA TGAATGCGAA TGTACTTGAC CAAAATGGTA AGGCGCAAAC CTTACTCATG
GGTTGCTATG GTGTTGGTGT GAGCCGTATG GTTGCCGCTG CAATCGAGCA GAACCACGAC
GACCGCGGTA TCATCTGGCC AGATGCGATT GCACCTTTCC GCGTTGGGAT CTTACCGATG
AACATGCATA AGTCTCATCG CGTTCAAGAT ATGGCAGAAC AGCTATATAA AGATCTAAGC
GATGCAGGTA TCGAAGTCTT GTTTGACGAT CGTAAAGAGC GCGCTGGTGT GATGTTTGCC
GACATGGAAT TGATTGGTCT TCCTCACGTT GTCGTGATTG GTGACCGTAA TATCGATGCA
GGTGTATTCG AGTATAAAAA CCGCCGCACA GGTGAGAAGC AAGAAGTGCC ATTCGATCAA
ATCGTTGAGT TCTTAAAGTC GGCTCAATAA
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| Protein sequence | MRVSKYLLST QKETPADAEV ISHQLMLRAG MIRRNASGLY SWLPTGLRVL RKIEAIVREE
MNKAGSVEIL MPMVQPADLW VETGRFEKFG PELLRFQDRH NRDFVLGPTH EEVITDIVRK
EVNSYKQLPL NLFQIQTKFR DEVRPRFGVM RSREFLMKDA YSFHLDQETM DETYESMFQA
YSNILTRLGL AFRPVIADTG SIGGSMSHEF HVLANSGEDL IAYSTGSDYA ANIEKAESPM
PTQTRGEATQ EMSLVDTPNA KTIAELVEQH GVAIEKTVKT LIVKGSSEEA PLVALVIRGD
HDLNEVKAEK IPAVHAPFEF ADEADIRKAV GAGPGSIGPV GLEIPVYIDH GVSVMSDFAA
GANQDNKHLF GINWERNLPQ AEAFDLRNII EGEASPCGQG TIALLRGIEV GHIFQLGKNY
SEAMNANVLD QNGKAQTLLM GCYGVGVSRM VAAAIEQNHD DRGIIWPDAI APFRVGILPM
NMHKSHRVQD MAEQLYKDLS DAGIEVLFDD RKERAGVMFA DMELIGLPHV VVIGDRNIDA
GVFEYKNRRT GEKQEVPFDQ IVEFLKSAQ
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