Gene Swoo_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3246 
Symbol 
ID6117565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3976877 
End bp3977359 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content40% 
IMG OID641634790 
Producthypothetical protein 
Protein accessionYP_001761611 
Protein GI170727585 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCA GTAAATACAT TGCTTTAATA TGTTTATTCG TTGCTCACTT TTCTTTTGCA 
GGTGTTGACC TTGTGAAAGT TGATAAGTCT GAAAGTAAAA TGTATTTACT GGACAGCGGG
CAAATAGTAA AAGAGTACGA TGTTGCTTTC GGTGCCAACC CTAAGGGACA TAAGGTACAG
GAAGGTGATG AGAAAACTCC TGAAGGAACA TATACACTCG ATTACAAAAA AGAGGACTCG
TCTTTTTATC GTGCAATGCA CATCTCATAT CCCAACAAGC AAGATATAGA GAACGCAGCA
AAGCGGGGAG TTTCACCTGG CGGTTTTATT ATGGTGCATG GCCAACGAAA TTGGCTTGGC
TGGTTTGCTC CAATTACTCA ATCGTTTAAT TGGACAAATG GATGTATAGC ACTCTCTAAT
TCTGAGATGG ATGAGTTTAT GGATTTGGTG AGTCTTGGAA CTGAAATTCA AATTGAGTGG
TGA
 
Protein sequence
MNASKYIALI CLFVAHFSFA GVDLVKVDKS ESKMYLLDSG QIVKEYDVAF GANPKGHKVQ 
EGDEKTPEGT YTLDYKKEDS SFYRAMHISY PNKQDIENAA KRGVSPGGFI MVHGQRNWLG
WFAPITQSFN WTNGCIALSN SEMDEFMDLV SLGTEIQIEW