Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3243 |
Symbol | |
ID | 6117562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3973349 |
End bp | 3975823 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641634787 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_001761608 |
Protein GI | 170727582 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.656974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAA TGTCTCTGGT TTGTGCCAGT ATCACATTGG CATTTTCAGG ATTAAGCGTC AGCGCCGAAA TAGACAAAGC CAATATTCAA CAATTTGGCC CCGTTGCTTC AGTCACTGCG CAAGCGTTAT CAGCAAGTAG TCACAACGAT GCACTAAGGG CTAACCTGGC TCAGTCTTTG TCACTTAATG ATGAAATAGA CATTTTAGGT GAAAGTTACC GTTGGGACAA AGCCAAAAAT AGTACTGATA AAGGCTGGAT TGGCTATAAA TTACAGCTCA GCGCAGAGCG ATTCACTCAA GGCACATTGA CCATTAATGG TGTTAATCAA CCGCAGGTCT ATCTTAATGG TGCGCTGTAT AAAGCTGACG CCAAAGTTGA GCTGGCATTG CAAAGTGGTG ATTACCAATT AATGATACTC GCCGATGGTA TCGATGAAGA GGTGCCGTTT AGCTTAGATT GGCAGGGTAA ATCTGACATT GATAATCCAA GCTTTACGAC GACCAAAACT CATAGAGTCT CGCCCGCACA ACTTTTTGAT TCAGAAGTGA TCACTAGCCT CAGCTTATCG CCAAATGGTA AATACTTACT GCAAACCAAA CGTCATTACC CAGCAAATAA CGATGACAAG CCTGTTGCCG TTACTGAGTT ACTAAATGTC TCTGATAAAC AAGTGATGTA TCGTTGGCAA GATAGTGCAC CTGCAAGTGC GACTTGGTCC GATAACAGTA AGCAGCTCGC ATTTGTCGCA GATAAGCAGA TTCAGTTGCT TACCGTATCT AATATCAGCA TTGATGTTGC AGCGACTCAA ATGGAAAATG TTTCAGCCCT TAAGTGGTAT GGAGATAGCC TTTTATTCCA ATGGGAAAAG CCCTTCAAAG CCGATGAAAA AGCGACCAAT AAACGTTTTC AAGCATTAGA AGATAGATGG AGCTATTGGC GCAACAACAG CCAAATATAC CAACTTGATA TTACTTCAGG TTTTATCCGT CAATTGACTG ATGGCAAACT CAGCAGCAAC CTACTTGATA GCCATCCAGA TGACGATAAG TTATTACTGA CTCGCTTCCC AGTCGATTAT AAAGAACCTG CACATGGGCT CACTCAGCTG GTCGAACTTG ATGTTAATAC ATTAACTGAA ACTCTGATTG GTGAATATCG AACTTTTAAT TCAGCAGTCT ACACTGATGA CGGCATGTAC ATCATGGCGG GCCCAGACTT TATGAAGGGC CTAGGCGTGC AAGACCCTTC TGTGGTGGTG AATAATTACG ATGGCCAATT ATACTGGCGC GACGCCAGCG GCAAAGTCAT TCCATTAAGC AAAGACTTTG ACCCCGCAAT AGGCGGCGCA GGAAAACTCA GTAATGATGA TTTAATTCTT CGTGTTGGCG AAGGTGATCG TGGTCAGCTC TACCTGTTCG ATTTAAGCCG TAAAAGCTTT AAAAAGATCA ATACCAGCAT GGACATGGTT AACCACTTCA GTGTTGCCAG CGATTTATCA AAACCCGTTA TCGCTTATGC CGGGACGTCA GCCACTGTGC CGCAAAAAGC GTACCTTATA AAATCTGGTA AAAAGGCATT ACTGTTTGAT AGCCAAGCGG CAAGCTATGC AGACACCCGT ATTGGTGGTA TTCAAGACTT TGATTTTACC AACTCCCACG GTCATAACAT TGATGGGCGG GTTTACTTCC CTGTGGATTT TGATGCAAAT AAACAATACC CAGCACTGGT GTATTATTAT GGTGGAACCG CACCAGTGAC CCGTAACTTT ACCGGTCGTT GGCCATTTAA CTTATGGGCA GCTAAAGGTT ATGTGGTTTA TGTACTACAA CCTAATGGTG CTACAGGTTA CGGCCAAGCA TTCAGTGGCC GTCATGTAAA CGCATGGGGC GATTACAGCG CTGACGATAT TATCGAAGGC ACACAAGCCT TCTTAAAAGA ACACAAGTTT GTCGATCCTA AACGCGTGGG TAACATGGGC GCCTCTTACG GTGGTTTCAT GACCATGTAT TTAGCCACTA AAACCGATAT CTTTGCGGCA TCCATGGCAC ATGCAGGGAT TAGTAATTTA TCAGCTTACT GGGGACACGG TTGGTGGGGA TATGGCTATT CAGGCGTAGC GAGTAAAGGC AGCTTCCCAT GGAATAATCG CGACTTATAT GTTGAACACA GCCCGCTATA CAATGCAGAC AAAATCAACA CGCCGTTGCT ATTACTCCAT GGTAATGCCG ACACCAATGT CCCTGTAGGT GAAAGTCATT ACATGTATAG TGCATTGAAA ATGTTAGATA AGCCTGTGGA GCTAATAGAG TTTAACGGCC AAGATCATCA CATCAATGGT CGCCAAGCTC GCTTTGATTG GTGGGATGCT ACCCTTGCAT GGTTCGACTT ACACCTAAAA GATGAACCAC AATGGTGGAA CAAACTCTAC CCTGAAACAA GCACTGAGAA TAATGCAGAA GCAGCGGTAA AGTAG
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Protein sequence | MKVMSLVCAS ITLAFSGLSV SAEIDKANIQ QFGPVASVTA QALSASSHND ALRANLAQSL SLNDEIDILG ESYRWDKAKN STDKGWIGYK LQLSAERFTQ GTLTINGVNQ PQVYLNGALY KADAKVELAL QSGDYQLMIL ADGIDEEVPF SLDWQGKSDI DNPSFTTTKT HRVSPAQLFD SEVITSLSLS PNGKYLLQTK RHYPANNDDK PVAVTELLNV SDKQVMYRWQ DSAPASATWS DNSKQLAFVA DKQIQLLTVS NISIDVAATQ MENVSALKWY GDSLLFQWEK PFKADEKATN KRFQALEDRW SYWRNNSQIY QLDITSGFIR QLTDGKLSSN LLDSHPDDDK LLLTRFPVDY KEPAHGLTQL VELDVNTLTE TLIGEYRTFN SAVYTDDGMY IMAGPDFMKG LGVQDPSVVV NNYDGQLYWR DASGKVIPLS KDFDPAIGGA GKLSNDDLIL RVGEGDRGQL YLFDLSRKSF KKINTSMDMV NHFSVASDLS KPVIAYAGTS ATVPQKAYLI KSGKKALLFD SQAASYADTR IGGIQDFDFT NSHGHNIDGR VYFPVDFDAN KQYPALVYYY GGTAPVTRNF TGRWPFNLWA AKGYVVYVLQ PNGATGYGQA FSGRHVNAWG DYSADDIIEG TQAFLKEHKF VDPKRVGNMG ASYGGFMTMY LATKTDIFAA SMAHAGISNL SAYWGHGWWG YGYSGVASKG SFPWNNRDLY VEHSPLYNAD KINTPLLLLH GNADTNVPVG ESHYMYSALK MLDKPVELIE FNGQDHHING RQARFDWWDA TLAWFDLHLK DEPQWWNKLY PETSTENNAE AAVK
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