Gene Swoo_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3236 
Symbol 
ID6117555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3964658 
End bp3965407 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content46% 
IMG OID641634780 
Productelectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_001761601 
Protein GI170727575 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.654108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT TGGTGCCTGT TAAGCGCGTC GTCGATGCAA ACGTAAAAGT CAGGGTAAAT 
GCTGACAATA CTGGCGTTGA TACCGCAAAC TTGAAGATGG CGATTAACCC TTTTTGTGAG
ATCGCAGTAG AGGAAGCCGT TCGTTTAAAA GAGGCTGGAA CTGCATCTGA GATCGTTGTG
GTCACTGTGG GGCCAAAAGC TGCACAAGAG CAACTAAGAA CGGCTATGGC ATTAGGCGCT
GATCGTGGTA TTCATATTGA AACCGATGAA GAGCTGGTAC CACTTTCTAT TGCTAAGTTG
CTGCTTAGTG TTCAGGAAAA AGAGCAAGCA GAGCTTATTT TACTTGGAAA GCAATCCATT
GATGGCGATA ACAACCAAAC TGGACAGATG CTAGCGGCGC TGGCAAAGAT GCCACAGGCA
ACGTTTGCGT CGGAAGTTAA GTTGGAGGGA GAGTCACTGG CTGTGACTCG TGAGATTGAT
GGCGGTTTGC AAACTGTTAC TATGCCACTA CCTGCGGTTG TGACTGTTGA CTTACGTCTG
AATGAGCCAC GCTATGCCAA GCTGCCTAAC ATCATGAAGG CTAAACGTAA GCCCCTTGAG
ACTGTCTCTA TTGATGATTT GGGCGTTAGC TTAAAGTCAC ATCAAAAAAC CTTGAAAGTA
TCACCTCCTT CAGAGCGCCA AGCAGGTGTT ATGGTCTCCT CTGTTGCAGA GCTGGTTGAA
AAGTTAAAAA ATGAAGCGAA GGTGATCTAA
 
Protein sequence
MKVLVPVKRV VDANVKVRVN ADNTGVDTAN LKMAINPFCE IAVEEAVRLK EAGTASEIVV 
VTVGPKAAQE QLRTAMALGA DRGIHIETDE ELVPLSIAKL LLSVQEKEQA ELILLGKQSI
DGDNNQTGQM LAALAKMPQA TFASEVKLEG ESLAVTREID GGLQTVTMPL PAVVTVDLRL
NEPRYAKLPN IMKAKRKPLE TVSIDDLGVS LKSHQKTLKV SPPSERQAGV MVSSVAELVE
KLKNEAKVI