Gene Swoo_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3235 
Symbol 
ID6117554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3963735 
End bp3964658 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content48% 
IMG OID641634779 
Productelectron transfer flavoprotein alpha subunit 
Protein accessionYP_001761600 
Protein GI170727574 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.320471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTT TAGTATTAGC AGAACATGAT AATGCCAGTT TAAAGCTGGA TACAGCCAAA 
GTGGTTGCCT GCGCTAGCGC GATTGGTGGC GACATCGATA TTTTAGTGGC TGGTCACGAA
TGTGGTGCTG TGGTTGAAGC CGCGCAGAAG CTTTCTGGCG TTAGACAGGT ACTGGTTGCA
GATAATGGTG CATATACCCA CAGCTTGGCT GAGAACATCG CTGAGTTGAT TGTGAACCTT
GCCTCAGATT ATGAACATAT CCTTGCTGCT GCATCTAGCC ATGGTAAAGA TGCCTTTCCT
CGTGTTTCAG CCTTGCTGGA TGTTGCTCAG CTCTCTGAAG TTGTTGAAGT CGTCAGCTCA
GATACTTTCG TTCGTCCTGT TTATGCCGGT AGCGCGTTGG CTACAGTACA GAGCTTGGAT
GATAAGAAGG TGATGACAGT TCGTACCAGC GCTTTTGATG CTGTAGGGGC TGATGGGGCC
GCTGCCGCGG TTGCTATCGA TAAAGTATTT GATTCACTTT CACAGTTTGT CTCTCAAACA
TTAACTGAGT CTGAGCGCCC TGAGCTTGGT GCCGCTTCAG TTGTTGTATC TGGTGGACGT
GGAATGGGAA GTGGTGAGAA CTTCTCTATC TTAGAACAGC TTGCCGACAA ACTTGGCGGC
GCTCTTGGTG CTTCTCGCGC CGCAGTGGAT GCTGGTTTTG TACCAAACGA CCTTCAAGTT
GGTCAAACGG GTAAAATAGT TGCACCGGAT CTTTATATTG CCGTGGGTAT CTCTGGGGCA
ATTCAACATC TGGCCGGAAT GAAAGACTCT AAGGTCATTG TGGCGATTAA CAAAGATCCA
GAGGCTCCTA TTTTCCAAAT TGCTGACTAT GGACTTGAAG CCGATCTATT TGAGGTCGTT
CCTCAGTTAA TCGAGTCAGT TTAA
 
Protein sequence
MAILVLAEHD NASLKLDTAK VVACASAIGG DIDILVAGHE CGAVVEAAQK LSGVRQVLVA 
DNGAYTHSLA ENIAELIVNL ASDYEHILAA ASSHGKDAFP RVSALLDVAQ LSEVVEVVSS
DTFVRPVYAG SALATVQSLD DKKVMTVRTS AFDAVGADGA AAAVAIDKVF DSLSQFVSQT
LTESERPELG AASVVVSGGR GMGSGENFSI LEQLADKLGG ALGASRAAVD AGFVPNDLQV
GQTGKIVAPD LYIAVGISGA IQHLAGMKDS KVIVAINKDP EAPIFQIADY GLEADLFEVV
PQLIESV