| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3230 |
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| Symbol | |
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| ID | 6117549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3959201 |
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| End bp | 3959764 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641634774 |
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| Product | methylation site containing protein |
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| Protein accession | YP_001761595 |
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| Protein GI | 170727569 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0504926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAATTAA ATAGAAAGCA GCAAGGTTTT ACCTTAATCG AGTTAGTCAT CGTCATCATC
ATACTGGGAG TGTTAAGTGT GATTGCTACG CCAAAGCTTC TTTCACTCTC AAGTGAAGCT
CAAGCATCTA GCTTACAAGG CATTACAGGG GCAATCGCGT CGGTCAATAA ACTGGTCCAC
TCCCAAACCC AAATTATTGG CATTGCAGAT AAGAATGAAT GTTTAGGTAC CTGTAACAAT
CACCCAAATT GGGATAACGA AATAGCTTAC TTCTACATAA ACATATCAGG AACTCGTCTC
TATGTGTATA ACGGTTACCC CTTATCCCCC CTAACCGCGC CATCCGACTC AATGGCTGCG
AATAACTATA AAGAAGTAAT GGGGCTATCT GATGATGACT TCGTATATGG AATGGGCTCA
AACTCCTCAT TTGCCATTGT ACCTAAAAAG TATGAGAGCA AATTAGCACA AATACTAGCA
GGAACTTTCA AATGTCATGT TGAATATCGT AGCCCTACAA GATCCTTTAA CTACTCAATT
CAAGCCCTTA CCGACAACTG CTAA
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| Protein sequence | MKLNRKQQGF TLIELVIVII ILGVLSVIAT PKLLSLSSEA QASSLQGITG AIASVNKLVH
SQTQIIGIAD KNECLGTCNN HPNWDNEIAY FYINISGTRL YVYNGYPLSP LTAPSDSMAA
NNYKEVMGLS DDDFVYGMGS NSSFAIVPKK YESKLAQILA GTFKCHVEYR SPTRSFNYSI
QALTDNC
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