| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3229 |
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| Symbol | |
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| ID | 6117548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3958282 |
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| End bp | 3958938 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641634773 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001761594 |
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| Protein GI | 170727568 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0245093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTAT CAAGAGAACA ACTCGCGCAA CGTGTGGCCC AAGAGCTTAA AGATGGTTAC
TACGTTAACC TCGGCATCGG TATTCCAACC TTAGTCGCAA ACTACATTCC CGACGGCATG
GACGTGATGC TGCAATCAGA AAATGGCCTA CTCGGCATGG GAGAATTCCC AACCGAGGAG
ACCATAGATG CAGACTTAAT CAATGCCGGC AAGCAAACTG TTACCGCCGT TGACGGTGCG
TCATTTTTCT CATCGGCGGA GAGCTTCGCG ATGATCCGTG GCGGCCATGT GGATCTAACG
GTACTCGGTG CATTTGAAGT CGATGAACAA GGTTCTATCG CCTCTTGGAT GATCCCAGGC
AAATTGATTA AAGGCATGGG CGGCGCAATG GATCTCGTGG CTGGCGCGGA TAACATTATC
GTCACCATGA TGCATGCAGA CAAGCGCGGT AACTCTAAAC TACTGCCAAA GTGTGAACTG
CCATTAACTG GCTTTGGGTG CATTAAACGT GTACTGACAG ACTTAGCTTT TATGGAGATA
AAAGATGGCG CGTTTCATCT GCTAGAGCGT GCTCCAGGCG TTACAGTTGA AGAGATAGTA
GCAAAGACAG CTGGTAAACT GATTGTTCCT GACAATGTGC CAGAGATGAG TTTTTAA
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| Protein sequence | MALSREQLAQ RVAQELKDGY YVNLGIGIPT LVANYIPDGM DVMLQSENGL LGMGEFPTEE
TIDADLINAG KQTVTAVDGA SFFSSAESFA MIRGGHVDLT VLGAFEVDEQ GSIASWMIPG
KLIKGMGGAM DLVAGADNII VTMMHADKRG NSKLLPKCEL PLTGFGCIKR VLTDLAFMEI
KDGAFHLLER APGVTVEEIV AKTAGKLIVP DNVPEMSF
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