| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3228 |
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| Symbol | |
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| ID | 6117547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3957564 |
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| End bp | 3958268 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641634772 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001761593 |
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| Protein GI | 170727567 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.761635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0239407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGGAC TCAATAAAGT CGTAGCAAGT TATGAAGAAG CCCTCGCAGG TCTAAGCAAC
GATATGACTG TGATGGTGGG AGGTTTCGGC CTTTGTGGTA TTCCTGAAGG CTTAATTGCA
CAAATGGTAA AAACCGGAGC CACAGGACTG ACTGCCATCT CAAACAATGC AGGCGTGGAT
GATTTTGGTT TAGGCTTGCT GCTTAAAACC CGTCAGATAA GTACCATGAT CGCCTCCTAT
GTCGGTGAAA ATGCCACCTT TGAGCAGCAG ATGCTCTCAG GCGAGCTAAA CGTCATACTC
ACACCTCAGG GGACACTTGC TGAGAAAATT CGAGCTGGTG GTGCTGGCAT TCCCGCTTTC
TTTACCGCTA CCGGCTACGG CACCCCCGTT GCTGACGGTA AGGAGACTCG CGAGATTGAT
GGCCGTCACT ATGTCCTTGA ACCATCATTA ACCGCTGATT TTGCCTTAAT TCGCGCTTGG
AAAGCCGATA CCATGGGAAA TTTGGTGTTC CGCAAAACCG CCGCTAACTT TAACCCTATG
ATGGCAACCG CTGGCAAGAT CACCGTGGTA GAAGCTGAGC ATATTGTTGA GGCTGGCGAG
TTAGATCCAG ATCATATTCA TACACCTGGC ATCTACGTAA ACCGCGTGAT CCAAGGAACG
TTCGAAAAGC GTATCGAACA GCGCACAGTA AAAGCATCAG CATAA
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| Protein sequence | MAGLNKVVAS YEEALAGLSN DMTVMVGGFG LCGIPEGLIA QMVKTGATGL TAISNNAGVD
DFGLGLLLKT RQISTMIASY VGENATFEQQ MLSGELNVIL TPQGTLAEKI RAGGAGIPAF
FTATGYGTPV ADGKETREID GRHYVLEPSL TADFALIRAW KADTMGNLVF RKTAANFNPM
MATAGKITVV EAEHIVEAGE LDPDHIHTPG IYVNRVIQGT FEKRIEQRTV KASA
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