| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3221 |
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| Symbol | |
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| ID | 6117540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3948048 |
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| End bp | 3949970 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641634765 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001761586 |
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| Protein GI | 170727560 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0171767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTG GGAATAATAA GCTGCATCAA CAGATGCACC AAGCTTCGGT GTCACAGCCT
GAGCAGTTCT GGGCCGATGC TGCACAGGCA CTAACTTGGG ATAAGCCTTG GGATAGAGTG
CTCGATGAGA GCAATATGCC GCTTTACGCT TGGTTTGCAG GTGGTGAGCT TAACACCTGC
TATAACGCAG TGGACAGGCA CGTTGAAGCG GGACGTGGCG CACAAGTGGC GATTCAATAT
GTCAGTCCCG TCACTGAGAC TGAGTATGGT ATCAGCTACA ATGAGCTTCA GGCTCAGGTG
AGTAGACTTG CGGGCTACAT GGACTCCATC GGGGTGAAAA AGGGCGATAG AGTGATTATC
TATATGCCTA TGGTGCCAGA AACCGCTTAT GCCATGCTGG CCTGTGCGCG TATTGGCGCT
ATTCATTCTG TGGTGTTTGG CGGTTTTGCT GGCAATGAAC TGGCCAGTCG AATCGATGAT
GCTAAACCTA AACTGATTTT ATCTGCCTCT TGTGGTATCG AGCCATCAGG GGTTGTAGCC
TATAAGCCGC TGCTAGATGA TGCAATTGCT CAATCGAGCC ACAAAGTAGA GCAGTGCATC
ATTCTTAATC GCAGTCAGCT CCAAGCTGAG TTGACCCCAA ACCGTGATGT GGACTGGCAG
AACGCAGTGG CTGATGCGCC AGATATTGGT TGTTTGAGTG TTGCAGCAAC TGACCCTCTT
TATATCCTTT ATACCTCAGG AACGACTGGT CAGCCAAAAG GCGTGGTGCG TGATAATGGC
GGCCACGGTG TCGCGCTGGC TTGGTCGATG AAGCATATTT ATGGCATTGA TGCAGGTGAT
GCTTTTTGGG CAGCGTCCGA TGTTGGCTGG GTTGTTGGTC ACTCCTATAT TGTGTATGGG
CCTTTACTGG TGGGGGCAAC GACCTTGATG TTTGAGGGCA AGCCTGTTGG CACGCCAGAT
CCGGGGATTT TCTGGCGCAC TATCGCAAAA TATCAAGTGA AGAGCTTTTT CACTGCGCCC
ACGGCGATAC GGGCGATAAA GCGTGATGAT CCCGATGGTG ACTTTTTGAA AGATGTCGAT
CTCTCTTGCC TTAATACTCT TTTTCTAGCA GGAGAGCGCT GTGATCCTGA CACCCTGCAT
TGGGCCGAGG AGCGACTTAA CAAGCCAGTT ATCGATCACT GGTGGCAAAC AGAAACGGGT
TGGCCCGTAG CGGCAAATTT GATGGGCACA GCCCCTGTAG AGGTAAAGGC GGGATCTCCA
GCTCTATCTG TTCCTGGTTA TCAGGTGGAA GTGGTCGATG AGATGGGCGA TAAAGTAGAG
GCTAACATCT CAGGTAACGT GGTGATTAAG CTGCCATTGC CGCCAGGAAC CTTGACGACC
CTATGGCAAA ATGAACAGAG GTACCTAGAG AGTTACCTGT CGATGTATCC AGGCTATTAT
CTCTCCGGTG ATGCAGGCTA TATGGATGAC GATGGTTATC TCTATATCAT GAGCCGAATT
GATGACATCA TCAATGTGGC AGGGCACCGT TTATCCACTG GGCGTTTCGA AGAGGTATTA
TGTCAGCATA ATGCAGTGGC TGAAGTAGCC GTAATTGGTG TGGAGGATAA ACTTAAAGGT
CAGGTTCCTC TAGGTTTAGT GGTGCTGAAA AAAGGGGTAA CGTTAAGTGA TGAAGCCCTT
TATAAAGAGC TGATAAGCTT AGTGCGTGAG CATATTGGGC CGGTTGCTTC ATTTAGGTTA
GTGAGTGCGG TGCAAAAACT ACCTAAAACA CGTTCCGGTA AGATTCTACG GGGAACCATG
CGTAAAATTG CCGATAACCA AGAGTATAAA GTCCCTGCGA CGATAGAAGA CCCTCAAACC
TTAGAACTGG TTCGTAACGC GTTAACCCGT ATGGGTTATG CCGATGCCCT GCTAGTTAAA
TAA
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| Protein sequence | MKSGNNKLHQ QMHQASVSQP EQFWADAAQA LTWDKPWDRV LDESNMPLYA WFAGGELNTC
YNAVDRHVEA GRGAQVAIQY VSPVTETEYG ISYNELQAQV SRLAGYMDSI GVKKGDRVII
YMPMVPETAY AMLACARIGA IHSVVFGGFA GNELASRIDD AKPKLILSAS CGIEPSGVVA
YKPLLDDAIA QSSHKVEQCI ILNRSQLQAE LTPNRDVDWQ NAVADAPDIG CLSVAATDPL
YILYTSGTTG QPKGVVRDNG GHGVALAWSM KHIYGIDAGD AFWAASDVGW VVGHSYIVYG
PLLVGATTLM FEGKPVGTPD PGIFWRTIAK YQVKSFFTAP TAIRAIKRDD PDGDFLKDVD
LSCLNTLFLA GERCDPDTLH WAEERLNKPV IDHWWQTETG WPVAANLMGT APVEVKAGSP
ALSVPGYQVE VVDEMGDKVE ANISGNVVIK LPLPPGTLTT LWQNEQRYLE SYLSMYPGYY
LSGDAGYMDD DGYLYIMSRI DDIINVAGHR LSTGRFEEVL CQHNAVAEVA VIGVEDKLKG
QVPLGLVVLK KGVTLSDEAL YKELISLVRE HIGPVASFRL VSAVQKLPKT RSGKILRGTM
RKIADNQEYK VPATIEDPQT LELVRNALTR MGYADALLVK
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