| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3211 |
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| Symbol | |
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| ID | 6117530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3938214 |
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| End bp | 3939134 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634755 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001761576 |
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| Protein GI | 170727550 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00337354 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000292198 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTTTG ATGATCAGGT TGCCGTTATT ACAGGAGCCG GAACAGGTTT AGGGAGAGCT
TATGCACTTG CCTTAGCTGA GAGAGGCGCT AAAGTTGCGC TTATTGATAC CTCTGTTTCA
ATAAGTGAAA AACGAGGCAG AATCGATTCT CCTAACCTTT TATCCTGCCA TAAAGCGATT
GAGGAGCTGG GGGCTACGGC GTGCATGTTT CAGCTTGATG TGAGGGACAA TCAAGGAGTG
AAATGTGTTA TTGATGAGAT TGTTGAGCTC TGGGGTCATA TCGATATTTT GATCAATAAT
GCGGGCGTAC ACCGCTCCTG CCCCTTTGAT AATCTAACTG TAGAGATGTG GCAAGAACAG
TTGGATGTCG ATCTTAACGG CAGTTTCTAC ATGACAAAAG CGGTGTGGAG CCAAATGAAA
CACCAAGGCT ATGGTAGGGT GATGATGAGT TGTGGTGTCA GCGCGCTTTA CGGTGACATG
TACGAAGCCT CCTATAGCGC AAGTAAGATG GCTTTGATAG GCCTAGTTAA TAGCTTGCAT
ATGGAGGGGG CGGAGCATGA CATTAAGGTC AACAGTCTGA CACCCCATGC GTTGACCTCA
ATGACTAAGG ACAGGTTAGC ATCATCGGTT AAGCCCCTAT TTTCAACCTC ATCGATCACT
GCTGCAATGC TATTTCTCTG TAGTCCTGGT GCTCCCTCAG GACAACATCT GTTAACTGCT
GCTGGCAGTG TTAGTCATGG GCAATTTACT GAGTTTAAGC CTATGTATCT TGACTCCGAT
TCCTGTAAGC CTGAAACTTT GCTCTCTGGT TGGGAGCAAC TTCATCACGC TCAGCCTGTT
AATCTGCATA ATAGCGGTGA AGATCAGGTA TTAGCTTGGG CAAGGCGAGG GGCATCTGAA
CATCATATTA GTATCGAATA G
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| Protein sequence | MRFDDQVAVI TGAGTGLGRA YALALAERGA KVALIDTSVS ISEKRGRIDS PNLLSCHKAI
EELGATACMF QLDVRDNQGV KCVIDEIVEL WGHIDILINN AGVHRSCPFD NLTVEMWQEQ
LDVDLNGSFY MTKAVWSQMK HQGYGRVMMS CGVSALYGDM YEASYSASKM ALIGLVNSLH
MEGAEHDIKV NSLTPHALTS MTKDRLASSV KPLFSTSSIT AAMLFLCSPG APSGQHLLTA
AGSVSHGQFT EFKPMYLDSD SCKPETLLSG WEQLHHAQPV NLHNSGEDQV LAWARRGASE
HHISIE
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