Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3208 |
Symbol | |
ID | 6117527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3936166 |
End bp | 3936735 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641634752 |
Product | hypothetical protein |
Protein accession | YP_001761573 |
Protein GI | 170727547 |
COG category | [S] Function unknown |
COG ID | [COG3575] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000236526 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000143866 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGACTCAAG CTAGAAAAAA TGGACAAGAC CTTTTTAGCC ATGAGTTAAC GCTCATTGAC TGGATAATGA AAGATCCCAT CAGAATGCGC GCACTTACTT TAATTAGAGA CTTAAACCTG CCTCAAGGGA TGATCGCTGC TGGGTTTGTT AGAAATTTAG TTTGGGATAG GCTACATGGC TATGAGCAGG GGAGAGCGCT AACAGATATT GATGTTATCT ACTTCGAGCC TAATGATACC TCTGTTGAAG CAGATAAAGC CTATGAGATG AAGCTTAAGG CACTTGCTCC TGAGCTGCCT TGGTCAGTTA AGAATCAAGC GAGAATGCAC ATTCGTAATG GTGACCCCTC GTATGGATCC TCTCTGGATG CCATGAGTTA TTGGCCTGAG CAGGAGACTG CAGTCGGCGT CTATCTGCAA CAAGAGCTAA CAGTCGTTTC AGCCTTTGGT TTCGATTCTC TATTTTTACT TAAGTTGACC CCAAATCCTA AACGTGATTT TGAGTTGTTT GAGGCTCGAG TGGCACAGAA GTCGTGGTTA ACTTATTACC CTAAATTGGA GATCAGTTGA
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Protein sequence | MTQARKNGQD LFSHELTLID WIMKDPIRMR ALTLIRDLNL PQGMIAAGFV RNLVWDRLHG YEQGRALTDI DVIYFEPNDT SVEADKAYEM KLKALAPELP WSVKNQARMH IRNGDPSYGS SLDAMSYWPE QETAVGVYLQ QELTVVSAFG FDSLFLLKLT PNPKRDFELF EARVAQKSWL TYYPKLEIS
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