Gene Swoo_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3208 
Symbol 
ID6117527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3936166 
End bp3936735 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content44% 
IMG OID641634752 
Producthypothetical protein 
Protein accessionYP_001761573 
Protein GI170727547 
COG category[S] Function unknown 
COG ID[COG3575] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000236526 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000143866 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGACTCAAG CTAGAAAAAA TGGACAAGAC CTTTTTAGCC ATGAGTTAAC GCTCATTGAC 
TGGATAATGA AAGATCCCAT CAGAATGCGC GCACTTACTT TAATTAGAGA CTTAAACCTG
CCTCAAGGGA TGATCGCTGC TGGGTTTGTT AGAAATTTAG TTTGGGATAG GCTACATGGC
TATGAGCAGG GGAGAGCGCT AACAGATATT GATGTTATCT ACTTCGAGCC TAATGATACC
TCTGTTGAAG CAGATAAAGC CTATGAGATG AAGCTTAAGG CACTTGCTCC TGAGCTGCCT
TGGTCAGTTA AGAATCAAGC GAGAATGCAC ATTCGTAATG GTGACCCCTC GTATGGATCC
TCTCTGGATG CCATGAGTTA TTGGCCTGAG CAGGAGACTG CAGTCGGCGT CTATCTGCAA
CAAGAGCTAA CAGTCGTTTC AGCCTTTGGT TTCGATTCTC TATTTTTACT TAAGTTGACC
CCAAATCCTA AACGTGATTT TGAGTTGTTT GAGGCTCGAG TGGCACAGAA GTCGTGGTTA
ACTTATTACC CTAAATTGGA GATCAGTTGA
 
Protein sequence
MTQARKNGQD LFSHELTLID WIMKDPIRMR ALTLIRDLNL PQGMIAAGFV RNLVWDRLHG 
YEQGRALTDI DVIYFEPNDT SVEADKAYEM KLKALAPELP WSVKNQARMH IRNGDPSYGS
SLDAMSYWPE QETAVGVYLQ QELTVVSAFG FDSLFLLKLT PNPKRDFELF EARVAQKSWL
TYYPKLEIS