| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3202 |
|---|
| Symbol | |
|---|
| ID | 6117521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3930451 |
|---|
| End bp | 3931653 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641634746 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001761567 |
|---|
| Protein GI | 170727541 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.573759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000552223 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTGGA AAATGAGTAC TGAGCAATTG AGTCAAGAGA TCGTGATTGT AGCCGCCAAG
CGAACCCCTA TGGGAGGCTT TCAAGGCGCA TTGTCGACGG TTCCATCTCC AAAACTGGCG
GCCACAGCCA TTAAAGGTTT GATAACACAA ACTGGTGTTT CTGTTGATGC TGTCGATGAA
GTGTTGATGG GGTGTGTGCT TCCAGCGGGC CTTGGTCAAG CGCCAGCTCG TCAAGCAACA
TTGGGGGCGG GACTGCCGCT GTCAGTTGGT GCAACGACTG TCAATAAGGT GTGTGGCTCA
GGCATGAAGA CTGTGATGCT AGCACACGAC CTTATTAAAG CGGGCAGTGC TGGTATCGTT
GTTGCTGGTG GTATGGAGAG CATGAGTCAA GCACCTTACT TGCTAGATAA AGCCCGTGGC
GGTATGCGTA TGGGTCATGG CAAGGTGATG GATCATATGT TCCTCGATGG CCTAGAAGAT
GCTTACACTG GCGGCGCAAT GGGCACATTT GCTCAAAAGA CGGCTGATGA TTTTAAACTT
ACCCGTGAAC AGATGGATGC CTTTTCACTA AGCTCACTCG AGAAAGCCAA TAAAGCGATT
GAAACTGGCG CCTTTAACGA TGAGATAACC CCTGTGACAG TAGAAAGTCG CCGTGGTGAC
ACTATCGTTG AGATTGATGA GCAGCCAGGC AATGCCCGTC CAGACAAAAT TCCAACTCTA
CGTCCAGCTT TCACTAAAGA TGGCACCATC ACTGCGGCCA ACTCAAGCTC AATCTCTGAC
GGAGCTGCGG CTCTGATGTT GATGACGGCT CAACAAGCAA ATGTGCTTGG CTTACCTGTT
CTTGCGACGA TTAAGGGACA CACTACCCAC GCACAGGAGC CATCCATGTT CACCACAGCG
CCAGTGGGCG CGATGAATAA GCTGTTTGAG AAGGTGAACT GGAGTGTCGA TGATGTAGAT
CTATTTGAGA TCAACGAAGC CTTTGCCATG GTGACCATGC TTGCCATCTC TGAGCTTTCA
ATCGATGCAG ATAAAGTGAA TGTCAATGGT GGTGCTTGTG CGCTGGGTCA TCCGATTGGT
TGCTCTGGTG CTCGCGTATT AGTCACGCTT ATTCATGCAC TCCATGCTCG TGGTTTAAAG
CGTGGTGTTG CATCGCTGTG TATTGGTGGC GGCGAATCGA CGGCAATGGC GATAGAGATT
TAA
|
|---|
| Protein sequence | MEWKMSTEQL SQEIVIVAAK RTPMGGFQGA LSTVPSPKLA ATAIKGLITQ TGVSVDAVDE
VLMGCVLPAG LGQAPARQAT LGAGLPLSVG ATTVNKVCGS GMKTVMLAHD LIKAGSAGIV
VAGGMESMSQ APYLLDKARG GMRMGHGKVM DHMFLDGLED AYTGGAMGTF AQKTADDFKL
TREQMDAFSL SSLEKANKAI ETGAFNDEIT PVTVESRRGD TIVEIDEQPG NARPDKIPTL
RPAFTKDGTI TAANSSSISD GAAALMLMTA QQANVLGLPV LATIKGHTTH AQEPSMFTTA
PVGAMNKLFE KVNWSVDDVD LFEINEAFAM VTMLAISELS IDADKVNVNG GACALGHPIG
CSGARVLVTL IHALHARGLK RGVASLCIGG GESTAMAIEI
|
|---|
| |