| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3201 |
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| Symbol | |
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| ID | 6117520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3928860 |
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| End bp | 3930365 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634745 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001761566 |
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| Protein GI | 170727540 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.55227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000671545 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACTC AGGTGAAACA CTATATCGAT GGCCAGTTTA TTGAAGGTCA GGGAAAGCAG
AAGATATCTG TAACTAATCC GGCAAATAAT CAGAGCATTG CAGTGGTTAA TGCGGCGACA
GTTTCTGAAG TTGAAACCGC CATTGCCAGT GCAAAGTTGG CGTTTAAAAG CTGGAAAGAG
GTACCTGTAT CGGAGCGTGC CCGTGTGATG TTTAATTACC AACATCTACT GAAAGCTCAT
CACGATGAGT TGGCAACGAT TCTGGCTCAA GAGACAGGTA AGACATTTGA TGATGCCAAA
GGTGATGTAT GGCGCGGCAT TGAAGTCGCT GAGCATGCTT GTAATATTGC GACCTTAATG
ATGGGTGAGA CGGTTGAAAA TGTGGCTCGC AGCATTGACA CCTACAGCTA CACTCAACCT
CTTGGTGTGT GCGCGGGCAT TACCCCCTTT AATTTCCCCG CGATGATCCC GCTGTGGATG
TTCCCGCTGG CTATCGCTTG TGGTAACACC TTTGTGCTTA AGCCTTCTGA GCAAGACCCT
ATGACGCCAC AACGTCTTGT GGAGTTGTTT GAAGAGGCGG GAGCACCTAA AGGCGTGTTG
CAGCTTATTC ATGGTGACAA GGTTGCGGTA GATGTGCTGC TTAATCATCA AGATATTAAG
GCTATCTCTT TTGTTGGTTC TGTGGGTGTC GGCCAATATA TCTATAAAAC AGGTACTGAT
AACTTAAAAC GAGTGCAGGC ATTTGCTGGT GCAAAGAACC ACTGCGTTAT TATGCCTGAT
GCGAACAAAC AGCAAGTGAT TAACAATTTA GTTGGCGCGT CAGTTGGCGC AGCAGGTCAA
CGCTGTATGG CGCTCTCAGT GGCTATTTTT GTTGGCGCGG CTAAAGAGTG GATCCCTGAA
CTGAAAGAGG CGATCGCTAA AGTTAAGCCT GGACTTTGGG ATGATAAAGA GGCGGCCTAT
GGCCCAGTTA TCAGCCCAGC GGCTAAGGCG CGAGTCTTAT CATTGATTGA GCAAGGTAAG
TCGGAAGGGG CTGAGTGCCT ACTCGATGGC TCTGACTTTA CTGTTGAAGG TTATGAAGCG
GGTAACTGGG TTGGGCCAAC CATGTTTACT AAGGTCACCA CTGAGATGAG CATCTATAAA
GAGGAGATCT TCGGGCCTGT ACTGTGTTGT ATGGAGTCAG AAACTCTTGA AGAGGCGATT
GAGGTGGTTA ATAACAGCCC TTATGGTAAC GGTACTTCAA TTTTCACTGC CAGTGGCGCC
GCTGCACGTA AATACCAACA TGAGATCGAA GTGGGTCAGG TAGGGATCAA TGTGCCTATT
CCTGTGCCAT TGCCATTTTT CTCCTTTACC GGTTGGAAAG GCAGCTTCTA TGGCGATCAA
CATGCCTATG GCAAGCAAGC GGTGCGCTTC TATACGGAAA CGAAAACCAT TACCTCTCGC
TGGTTTGAGT CTCAGATATC TACAGCTGAG CATGCTGCAC CAAATATGAC CATTGATCTT
AAGTAA
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| Protein sequence | MTTQVKHYID GQFIEGQGKQ KISVTNPANN QSIAVVNAAT VSEVETAIAS AKLAFKSWKE
VPVSERARVM FNYQHLLKAH HDELATILAQ ETGKTFDDAK GDVWRGIEVA EHACNIATLM
MGETVENVAR SIDTYSYTQP LGVCAGITPF NFPAMIPLWM FPLAIACGNT FVLKPSEQDP
MTPQRLVELF EEAGAPKGVL QLIHGDKVAV DVLLNHQDIK AISFVGSVGV GQYIYKTGTD
NLKRVQAFAG AKNHCVIMPD ANKQQVINNL VGASVGAAGQ RCMALSVAIF VGAAKEWIPE
LKEAIAKVKP GLWDDKEAAY GPVISPAAKA RVLSLIEQGK SEGAECLLDG SDFTVEGYEA
GNWVGPTMFT KVTTEMSIYK EEIFGPVLCC MESETLEEAI EVVNNSPYGN GTSIFTASGA
AARKYQHEIE VGQVGINVPI PVPLPFFSFT GWKGSFYGDQ HAYGKQAVRF YTETKTITSR
WFESQISTAE HAAPNMTIDL K
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