Gene Swoo_3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3188 
Symbol 
ID6117507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3913031 
End bp3914392 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content48% 
IMG OID641634733 
Productleucyl aminopeptidase 
Protein accessionYP_001761554 
Protein GI170727528 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0260] Leucyl aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.778722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATT TATTGATTTC AGGTGCTTCA GGTACCCCAC TCTCTATTCT CCATACAGAT 
TCTTTCGACG CCTGGTTAAC AGAGCAAACT CAGCAAACCA AAAACTGGTT ATCTACAACA
CAATTTAGCG GTAAAGGGAT GAGCCTTATT CCCGATGCTA ATGGTGAACT CTCGCAGGTG
ATTTTTGTCA GCAGCGAACC CGAGTCCTAC TGGGTATGTG GCGATCTAGT CAATCAACTT
CCCGCTGGCC AATACCAGCT AAAAGCAAGT GAAGAGCAAC TGAAAGTGGC TGCATTCAGC
TGGGGTCTAG GTGCTTATAA GTTTGACCGT TACAAGAAAA ATGAAAAAAC TTACCCAACA
CTTGTGATTA ATAATCAACA GATAGTTGAG CAAGCACAGA AATTAGTTCG CTCAGTTTCT
ATCGTCAGAG ATCTCGTCAA TACACCAGCA GCCGATATGA TGCCGCAGCA CTTAGGTGAC
ACCATGGAAG CCTTGGCCAC TGAGTTTGGG GCTAAAGTAA GCCAGATAGT CGGTGATGAT
CTTCTTAAAC AGAACTACCC CACTATCCAT ATGGTTGGCC GCGCAAGTGA GAACCTACCG
CGTCTTATCG ATCTTACATG GGGTGATGAG TCCGCGCCGC AAGTGACTCT AGTCGGTAAA
GGAGTCTGTT TCGACTCTGG TGGACTCGAT CTAAAGCCTG GCGCTGGTAT GCGCTTAATG
AAGAAAGATA TGGGAGGTGC AGCCCATGTG ATAGGTCTAG CACATCAGAT CATGGCCAGT
AACTTGCCGA TCCGTTTACG TGTACTTGTA CCTGCCGTTG AGAACGCCGT ATCAGCTAAT
GCCTTCCGTC CAGGCGATGT TATCACTACC CGTAAAGGGA TCACCGTTGA GATTGATAAC
ACTGATGCCG AAGGCCGTTT AGTACTGTGT GACGCCCTTG CAGAAGCTAA CAATGACAAT
CCTGATTTAG TTATCGATTT TGCCACCTTA ACAGGTGCTA TGCGGATCGC ATTGGGCACC
GAACTGCCTG GCTTTTTCAG TAACGATGAT ACCTTGGCTG CCGAGATGAC AGTCTCAGGG
CTCAAGGTTG AAGACCCAAT CTGGCGCATG CCACTACACA AACCTTATAT GGAGCTCACA
GGCAGCGATA TTGCCGATCT AGCAAACTGT GGCAAAACCC CTTTTGGAGG AGCCATTACA
GCGGCGCTTT ATCTAGAAGC CTTTGTTGAG AAGGAGATAA GCTGGGCACA TTTCGACGTC
ATGGCTTGGA ATAACCGTAA ACTGCCAGGT CGTCCTGTCG GCGGTGAAGC CTTCGGTATT
CGCGCAGTAT TCGATTACCT AGAAACTCGC TTCAAGAAAT GA
 
Protein sequence
MTNLLISGAS GTPLSILHTD SFDAWLTEQT QQTKNWLSTT QFSGKGMSLI PDANGELSQV 
IFVSSEPESY WVCGDLVNQL PAGQYQLKAS EEQLKVAAFS WGLGAYKFDR YKKNEKTYPT
LVINNQQIVE QAQKLVRSVS IVRDLVNTPA ADMMPQHLGD TMEALATEFG AKVSQIVGDD
LLKQNYPTIH MVGRASENLP RLIDLTWGDE SAPQVTLVGK GVCFDSGGLD LKPGAGMRLM
KKDMGGAAHV IGLAHQIMAS NLPIRLRVLV PAVENAVSAN AFRPGDVITT RKGITVEIDN
TDAEGRLVLC DALAEANNDN PDLVIDFATL TGAMRIALGT ELPGFFSNDD TLAAEMTVSG
LKVEDPIWRM PLHKPYMELT GSDIADLANC GKTPFGGAIT AALYLEAFVE KEISWAHFDV
MAWNNRKLPG RPVGGEAFGI RAVFDYLETR FKK