Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3188 |
Symbol | |
ID | 6117507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3913031 |
End bp | 3914392 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641634733 |
Product | leucyl aminopeptidase |
Protein accession | YP_001761554 |
Protein GI | 170727528 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0260] Leucyl aminopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.778722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAATT TATTGATTTC AGGTGCTTCA GGTACCCCAC TCTCTATTCT CCATACAGAT TCTTTCGACG CCTGGTTAAC AGAGCAAACT CAGCAAACCA AAAACTGGTT ATCTACAACA CAATTTAGCG GTAAAGGGAT GAGCCTTATT CCCGATGCTA ATGGTGAACT CTCGCAGGTG ATTTTTGTCA GCAGCGAACC CGAGTCCTAC TGGGTATGTG GCGATCTAGT CAATCAACTT CCCGCTGGCC AATACCAGCT AAAAGCAAGT GAAGAGCAAC TGAAAGTGGC TGCATTCAGC TGGGGTCTAG GTGCTTATAA GTTTGACCGT TACAAGAAAA ATGAAAAAAC TTACCCAACA CTTGTGATTA ATAATCAACA GATAGTTGAG CAAGCACAGA AATTAGTTCG CTCAGTTTCT ATCGTCAGAG ATCTCGTCAA TACACCAGCA GCCGATATGA TGCCGCAGCA CTTAGGTGAC ACCATGGAAG CCTTGGCCAC TGAGTTTGGG GCTAAAGTAA GCCAGATAGT CGGTGATGAT CTTCTTAAAC AGAACTACCC CACTATCCAT ATGGTTGGCC GCGCAAGTGA GAACCTACCG CGTCTTATCG ATCTTACATG GGGTGATGAG TCCGCGCCGC AAGTGACTCT AGTCGGTAAA GGAGTCTGTT TCGACTCTGG TGGACTCGAT CTAAAGCCTG GCGCTGGTAT GCGCTTAATG AAGAAAGATA TGGGAGGTGC AGCCCATGTG ATAGGTCTAG CACATCAGAT CATGGCCAGT AACTTGCCGA TCCGTTTACG TGTACTTGTA CCTGCCGTTG AGAACGCCGT ATCAGCTAAT GCCTTCCGTC CAGGCGATGT TATCACTACC CGTAAAGGGA TCACCGTTGA GATTGATAAC ACTGATGCCG AAGGCCGTTT AGTACTGTGT GACGCCCTTG CAGAAGCTAA CAATGACAAT CCTGATTTAG TTATCGATTT TGCCACCTTA ACAGGTGCTA TGCGGATCGC ATTGGGCACC GAACTGCCTG GCTTTTTCAG TAACGATGAT ACCTTGGCTG CCGAGATGAC AGTCTCAGGG CTCAAGGTTG AAGACCCAAT CTGGCGCATG CCACTACACA AACCTTATAT GGAGCTCACA GGCAGCGATA TTGCCGATCT AGCAAACTGT GGCAAAACCC CTTTTGGAGG AGCCATTACA GCGGCGCTTT ATCTAGAAGC CTTTGTTGAG AAGGAGATAA GCTGGGCACA TTTCGACGTC ATGGCTTGGA ATAACCGTAA ACTGCCAGGT CGTCCTGTCG GCGGTGAAGC CTTCGGTATT CGCGCAGTAT TCGATTACCT AGAAACTCGC TTCAAGAAAT GA
|
Protein sequence | MTNLLISGAS GTPLSILHTD SFDAWLTEQT QQTKNWLSTT QFSGKGMSLI PDANGELSQV IFVSSEPESY WVCGDLVNQL PAGQYQLKAS EEQLKVAAFS WGLGAYKFDR YKKNEKTYPT LVINNQQIVE QAQKLVRSVS IVRDLVNTPA ADMMPQHLGD TMEALATEFG AKVSQIVGDD LLKQNYPTIH MVGRASENLP RLIDLTWGDE SAPQVTLVGK GVCFDSGGLD LKPGAGMRLM KKDMGGAAHV IGLAHQIMAS NLPIRLRVLV PAVENAVSAN AFRPGDVITT RKGITVEIDN TDAEGRLVLC DALAEANNDN PDLVIDFATL TGAMRIALGT ELPGFFSNDD TLAAEMTVSG LKVEDPIWRM PLHKPYMELT GSDIADLANC GKTPFGGAIT AALYLEAFVE KEISWAHFDV MAWNNRKLPG RPVGGEAFGI RAVFDYLETR FKK
|
| |