Gene Swoo_3184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3184 
Symbol 
ID6117503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3908415 
End bp3909548 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content45% 
IMG OID641634729 
Producthypothetical protein 
Protein accessionYP_001761550 
Protein GI170727524 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTT TTCAAACTCA ATGGCATGAT AATCACTGGG CTCAAAGCGA TAAGATAGAA 
GATCTCGATA GCAAGCAGAC ACTTATTCTT ATTTTTGGAG AGATACACCT CCAACCTGAT
GCCATCGCAA AGATGAAAAG TTTATCTCCA AATGCCTGTA TCACAGGTTG CTCCACGGCG
GGAGAGATCC AGGGAAGGCA AGTTAATGAT GACAGCCTTA TCGCCACGAT TATTGCTTTT
GAAAAAACCA ATATCACCAT GATAAGGGGA GTTGATAAAC CAGATATCAA CTCAAAAGAG
CTCGGCGTAA ATCTAGCAAA TCAACTGAAT GAGACCGATA ATCTCTGCCA TGTATTAGTT
TTAAGTGACG GTCTCGGCTT CAATGCCAGT CACCTCATAG AGGGGATGAC AGATATACTC
GGGTTAGATA TACAAGTATC TGGTGGCTTA GCAGGGGATA GACATAATTT TGTCAAAACT
CATCTGCTTT TTAATGACGA GGTCACCTCA TCAGCGGTTA TCGCTATCGG TTTCTATGGT
GAGCAACTTG AGGTCAGCTG TGGCACTCGA GGGGGCTGGT GCTCATTTGG CATTGAGCGG
CGAGTGACAC AAGCTGAAAA CAACATGCTA GTAGAGCTCG ACGATGAAAA TGCACTCTCT
ATTTACAAAA GTTATCTCGG AGAGCTCGCA GAGCAGTTGC CAGCAAGCGG CTTAAGATTT
CCACTGGAGA TCAGTGAGCC CAATAAGATA ACCAAGGTGG TTAGAACCCT GCTCGCTGTC
GATGAGGAGA CCGGCACCCT CACATTTGCA GGCAATATCC CCACAGGAGC AACCGCGCAG
CTGATGCGCT CTAATGTCGA ATCTTTAATC CAAGGTTCAT TAGAGGCTGG AAAGATATGT
CGTCATAACA TCTCAAGCAG TCCGCAAGTT GCCATATTGA TCAGTTGTGT GGGCAGAAAG
TTGGTATTAA AGCAGCTTGT GGAGGATGAG ATAGAGGTCA TTAGTGAAGA GTTAGGTGAA
CAAGCACTAC TTTGCGGATT TTATTCTTAC GGAGAAATAG CCCCCTATGA TAGAGGTTGC
CTAGCTGAAC TCCACAATCA AACGATGACT ATTACTGCCT TCGCGGAAAT TTAA
 
Protein sequence
MKTFQTQWHD NHWAQSDKIE DLDSKQTLIL IFGEIHLQPD AIAKMKSLSP NACITGCSTA 
GEIQGRQVND DSLIATIIAF EKTNITMIRG VDKPDINSKE LGVNLANQLN ETDNLCHVLV
LSDGLGFNAS HLIEGMTDIL GLDIQVSGGL AGDRHNFVKT HLLFNDEVTS SAVIAIGFYG
EQLEVSCGTR GGWCSFGIER RVTQAENNML VELDDENALS IYKSYLGELA EQLPASGLRF
PLEISEPNKI TKVVRTLLAV DEETGTLTFA GNIPTGATAQ LMRSNVESLI QGSLEAGKIC
RHNISSSPQV AILISCVGRK LVLKQLVEDE IEVISEELGE QALLCGFYSY GEIAPYDRGC
LAELHNQTMT ITAFAEI