Gene Swoo_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3178 
Symbol 
ID6117497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3902240 
End bp3902668 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content40% 
IMG OID641634723 
Producthypothetical protein 
Protein accessionYP_001761544 
Protein GI170727518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.61812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAACA CGATATTAGG TATATGCGCA GTTCTATTGA TGGCGTTTTC GTTTCAAGGA 
GTGGCATCTA CAGAGTGGAT AAAGATTGCT GACAAGACAG TTAATTACAA AACTGAAACC
GATACCGTGA CGCCGAGAGG TAGTGAGAAA AATGTGACTC ACATTAAGCT TAAGTGCACT
CAAGGAACAG TTAATCTGCA TAAAGTTGTC ATTAACATGA GTGACGGGAC GAGTAAAACG
CTAGATAACC TCGGAGTGTT AACTAAAGGA TTATCGAGCC GCAGTATCTC TATTCCGAAA
GGTGATCTGA AAATAAAGTC TATCGATTTG ACCTATGACA GTGTCGGTAG TCAAACATTA
GCTATTGCGG GAGTTTCCAA GAAAGGCAAA TTGGATCTGC TGGGGAAAAA ACCTGCTAGT
AAGCAATAA
 
Protein sequence
MKNTILGICA VLLMAFSFQG VASTEWIKIA DKTVNYKTET DTVTPRGSEK NVTHIKLKCT 
QGTVNLHKVV INMSDGTSKT LDNLGVLTKG LSSRSISIPK GDLKIKSIDL TYDSVGSQTL
AIAGVSKKGK LDLLGKKPAS KQ