Gene Swoo_3177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3177 
Symbol 
ID6117496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3901243 
End bp3902211 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content40% 
IMG OID641634722 
Productlipase chaperone-like protein 
Protein accessionYP_001761543 
Protein GI170727517 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5380] Lipase chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAGC AAGTAAAACA AAGTGCTAAC AGCCCCCTTT CGGCAAAAAG TATTATGCTT 
TTAAGCTTAA TTCTTGCCTT AGTCGTGGGG GGGCTAATCT ATTTTAATGT GCAACATTAC
TCATCAACGG TCACCAATAC CGACGTCAAA ATAGAAGAGT TCAAGATACA ACCTGAGCCC
GTTAAAGAGG ATAAAGTCGC CTCCCGAAAT ATAGGGCAAT CAGAGCTTGA GTTAAACGAA
GAGCTCAGAT GGAAATTTGA TGAGTTAATT CTCACTCATC AAGAGACAGG TCAAACCATA
ACGATCCTAT TAAACAAGCT CTCTACCCAA CTGGATTTAA CTCCTGAGGC TCATATATAT
CTACTGGATC TTTTTAGTCG CTATCGCGAT TATAAAATCG CCTTAGTTGA GATAAAACAA
ACGGGCCCTA ACATGCTCAG TGAACTCAAT ATTGATGACA CAATGAACTT TATAGAGCGC
GCCCATCAAA GCCAATTTGA TTATTTTACC CAAGTTGAAA TAGAAGCCTT TTTTTCTCAT
GAAAATCGCT ACGACAATCA AGCAATAGAG AGAATGGCTA TCTTACAGGA CAGTTCACTT
TCCACTCAGC AGAAGCAGAT GCTAATCACC CATCAAATAA GCCAGATGGA TGAGGAGGAG
AGAGAGGTGT ATGAGCCTAC TCTGCAGGTT TTTAATATCG TCGATAATTT AGATGGCAAT
AGTAACCAAC TCAATGAGTT TACACCGCAA GTGATGGAGA GAATTGAGCA ATTAAAAGCG
GATGAACAGG CTTGGAAATT AAAAGTTAAA GAGTTTCAAT CCTTTGAAAT TAAAAGTAGA
GGTGAATTCA CCGATCAACA GGAGGTTGAA GAGGCACTAA GTCACTACCA AGGTCAACAT
TTCACTCCAA ATGAAATAAA GCGGCTTAAG GTATATATCA ATAACCCTGA ACTGTTAAAT
GCAGGCTAG
 
Protein sequence
MPQQVKQSAN SPLSAKSIML LSLILALVVG GLIYFNVQHY SSTVTNTDVK IEEFKIQPEP 
VKEDKVASRN IGQSELELNE ELRWKFDELI LTHQETGQTI TILLNKLSTQ LDLTPEAHIY
LLDLFSRYRD YKIALVEIKQ TGPNMLSELN IDDTMNFIER AHQSQFDYFT QVEIEAFFSH
ENRYDNQAIE RMAILQDSSL STQQKQMLIT HQISQMDEEE REVYEPTLQV FNIVDNLDGN
SNQLNEFTPQ VMERIEQLKA DEQAWKLKVK EFQSFEIKSR GEFTDQQEVE EALSHYQGQH
FTPNEIKRLK VYINNPELLN AG