Gene Swoo_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3170 
Symbol 
ID6117489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3888654 
End bp3889469 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content43% 
IMG OID641634715 
Producthypothetical protein 
Protein accessionYP_001761536 
Protein GI170727510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0508487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGGAT CAATAAAAAA AATGCGTGCC ACACTGGATG ATAACCAGCA GGTACAGTAT 
CAATTGCCAA TTGGCGATCA ATTAGTAGAG ATGAACCCGC TTATTGGTAC AAGCGTGACC
TTAACTCACA CAGGCAAAAT AAGCTGTAGT AACTGCGGTA AGAAAACCAA GAAGAGCTAC
TCTCAAGGTC ACTGCTTTGT CTGTATGAAA AAACTAGCTA GCTGTGACAT GTGCATAATG
AAACCAGAGA CTTGCCACTT TGCACAGGGA ACCTGCCGTG AGCCTGAATG GGGAGAAGCT
AACTGCTTTG TGCCACATTA TGTTTACCTT TCAAACACCT CTGGTCTTAA AGTGGGGATC
ACTCGACACA CCCAACTACC TACCCGTTGG ATAGATCAAG GCGCGACTCA GGGATTGCCT
ATCTTAAAGG TCTCAACGAG GCAGATCTCT GGCTTAGTTG AAGTCGAACT GGCTAAGATG
ATTGCCGATA AGACAAATTG GCGCACTATG CTCAAAGGCA ATGCTGAAGC GATAGATCTC
AAGGCTAAAG CCGCTGAACT TCTGCCTGAA GTTGAAAACA AGATACATGA GATCTGCATG
AAAAATGGTG AGTATGCCAT TGAAAAGCTA AATGAAGATA TTCAGGACAT TCAGTTTCCA
GTCACTGAAT TTCCAACCAA AATCAGCTCA CACAACTTCG ATAAAGACCC TGTTGTCAGC
GGTGTATTGC TTGGCATTAA AGGGCAGTAC TTAATCTTCG ATACTGGCGT CATTAACCTT
AGAAAGTTCA CCTCTTACGA GATAAGCCTA AGTTAA
 
Protein sequence
MLGSIKKMRA TLDDNQQVQY QLPIGDQLVE MNPLIGTSVT LTHTGKISCS NCGKKTKKSY 
SQGHCFVCMK KLASCDMCIM KPETCHFAQG TCREPEWGEA NCFVPHYVYL SNTSGLKVGI
TRHTQLPTRW IDQGATQGLP ILKVSTRQIS GLVEVELAKM IADKTNWRTM LKGNAEAIDL
KAKAAELLPE VENKIHEICM KNGEYAIEKL NEDIQDIQFP VTEFPTKISS HNFDKDPVVS
GVLLGIKGQY LIFDTGVINL RKFTSYEISL S