Gene Swoo_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3152 
Symbol 
ID6117471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3867732 
End bp3868592 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content43% 
IMG OID641634697 
Producthypothetical protein 
Protein accessionYP_001761518 
Protein GI170727492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGATTT TAACTTTTTT TAGCCCATAT ATTTTACTAT TTTGTGCATT ACCAGTTAAC 
GCTGAGCCTC AGGTTATTCG TTACAATATT TCTGATCAGT TTGTGGATCC GAAACAGAGC
TATTATATCG ACTTACTGCG TTTAGCACTG GAGAAGAGTC GTGAACCTTA TGGTGATTAC
CAACTTCAAG CTGTGGTGAG TGAGATGGCT CAGGCCCGTA CGGTTCAACT GGTACAAAAG
GGCGAGTTAG ACTTAGTGTG GACCATGACC AGTATCGATA GAGAGCGCAG ACTTACTCCA
GTTTATTTTC CATTACTTAA AGGCTTGATG GGCTATAGAA TTGCGATAAT CCGGCGTCAA
GATAAGCAGA GGTTCGCCGA CATTGAAAGT GTTGAGGAGC TTCAAGTTAT TCCTGTTGGT
CAAGGAAGTG ACTGGCCTGA TAGTGATATC TTGCAAAAGC AAGGTTTTAC CTTAGTGAGG
GGGGCGGCTC GCAGCTTGCT CTCAATGCTG AATATGCATC GTTTCGATTA CTTTTTACGT
GCTCTTCATG AACCATGGGA TGAAGTGATT GGACATCCTA GTCTGATGAT CGACTCCTCC
TTTGTGATTA TCTACCCCTC CCCTATCTAT TTTTTCGTTA ATCCGGATGA TAAAAGACTG
GCTGAGCGGG TCGAGTATGG CTTGAGAAAC GCGTTACTAG ATGGCAGTTT CGAAGCACTA
TTTAATCATC ATGCTATTAC TTCCCAAGTG ATTGAGCGTG CGAATTTACC GTTAAGGCGG
ATATTTACTC TAGATAATCC CTTGCTGTCT CAAGAGAGTA AAAACCTCCT GAGTGAGAAG
GAGCTTTGGT TTAAACAGTA A
 
Protein sequence
MRILTFFSPY ILLFCALPVN AEPQVIRYNI SDQFVDPKQS YYIDLLRLAL EKSREPYGDY 
QLQAVVSEMA QARTVQLVQK GELDLVWTMT SIDRERRLTP VYFPLLKGLM GYRIAIIRRQ
DKQRFADIES VEELQVIPVG QGSDWPDSDI LQKQGFTLVR GAARSLLSML NMHRFDYFLR
ALHEPWDEVI GHPSLMIDSS FVIIYPSPIY FFVNPDDKRL AERVEYGLRN ALLDGSFEAL
FNHHAITSQV IERANLPLRR IFTLDNPLLS QESKNLLSEK ELWFKQ