Gene Swoo_3151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3151 
Symbol 
ID6117470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3865815 
End bp3867548 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content47% 
IMG OID641634696 
Productphosphoglucomutase/phosphomannomutase alpha/beta/subunit 
Protein accessionYP_001761517 
Protein GI170727491 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.492752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAC AATTAGCATT GAGAGTAAAA AATTGGATAG AAGCTGATCC AGATCCTCGT 
TCGAAGAGAG AGCTTCAACA GTTAGTCGAT AACAATGATG ACACTGAACT TGGGAAACGT
TTTGCTGGCA GACTGGCTTT TGGTACTGCA GGGTTAAGGG GCGTGGTTGG GGCAGGTCCA
ATGGGCATGA ATCGATTTGT CGTGCAGCAA ACCACATCAG GGCTTGGAAG CTATCTGAAA
GCTCAGGTAA GTGACCTTGA CTCACGTGGT GTGGTGATAG GCTATGACGG TCGTCATGAC
TCTAAGCAGT TTGCCCATGA TGCAGCGGGT GTGCTGACAG CGATGGGTAT CAAGGTTTAT
TTGACCAGTA ACGTTGCCGC TACACCACTC GTGGCTTTTG GTGTACTGCA TTTTGGGGCC
GCAGCTGGCA TTGTGGTGAC GGCCAGCCAT AATCCGCCAC AATATAATGG TTATAAAGTT
TATTGGGGCA ATGGCGCGCA AATCATTCCA CCTCACGATT CAGGTATTGC AGCCTGTGTT
CATCAAGCTG CCGATCAGTC TATCTGCAGA ACTATTGAGT TACTCAGCCT AGAGCAAGCT
CGGCTTTCTG GCACCTTAGT GATGTTGGAA GATGATTTCT ATCAGACCTA TCGACAAGGG
ATTCAAGATG CCGAGGTGTT ACAAAATCAT ACTCGGCCAG AGTTAGTGAG CTTAGCTTAT
ACGGCGATGC ATGGTGTCGG GGCTGAAATG GCTGAAACCG TGCTTAAGGA TGCAGGTGTC
AGTCAGGTGT ACTCTGTGGC TGCTCAACGG GAGCCAGATG GTGATTTCCC AACGGTGAAT
TTCCCTAATC CTGAGGAGAA GGGGGCGATG GATCTAGTGA TTGCAGAGGC AACAAAACAT
GACGCTATGT TAGCTTGTGC CAACGATCCT GATGCTGACC GATTCGCTGT TGCGGTTAGA
AAGAGAGCAG GTGATTATCA GATGTTGACA GGAGATCAGG TGGGAGTGCT CTTTGGTCAT
TATTTACTGA AACACGCGTC TAAAGAGCAA CGTTTGACCT GTACCACTAT TGTGTCATCA
AGTTTACTAT CGAAAGTTGC GGCGAGTATG GGGGCAAGGT GTATTACGAC ACTGACGGGC
TTTAAATGGC TCATGAACGT GGCGATAGCA GAACAAACCC CTGATAACCG TTTTTTATTT
GCCTATGAAG AGGCGCTAGG TTACACAGTT GGGGATATGG TGTGGGACAA AGATGGGCTA
TCTGCGCTCG TGGCTTTCTC GCAATTAACT GCTGAACTTG CAAGCAAAGG CGAGACGATT
TGGGATAGAT TAGCGGATAT CTATAAAGAG CATGGCTTCC ACCTTAATGC TCAGGTGAGT
ATCGCATTAA AGCCCGATAC TCCAAATATA GGCGCTTATC TTCGTGAGCA CCCACCAGTA
ACAGTGGCAG GACGTAAAGT GCTCTCTGTT GATGATATCA GTTGTGGTGA GCGCAGATTT
GCTGATGGCC GACTTGAAAC CATTGCGCTA CCTTTAAGTG ACGTACTTAT TTACAGCTTA
GAGGGAGGGG CTAGGGTGAT AGTGAGGCCC TCTGGGACTG AGCCAAAAAT AAAATGTTAT
TACGAAGTTG TTGAAATTAT GGGAATAGAT GATAGTTTAG AAACAGCTCA ACTAAGAGCA
CGCGCTCAAA TGGATAAATT TATTGAAGCC CACCAAGCTT CATTACCTAA GTAG
 
Protein sequence
MNTQLALRVK NWIEADPDPR SKRELQQLVD NNDDTELGKR FAGRLAFGTA GLRGVVGAGP 
MGMNRFVVQQ TTSGLGSYLK AQVSDLDSRG VVIGYDGRHD SKQFAHDAAG VLTAMGIKVY
LTSNVAATPL VAFGVLHFGA AAGIVVTASH NPPQYNGYKV YWGNGAQIIP PHDSGIAACV
HQAADQSICR TIELLSLEQA RLSGTLVMLE DDFYQTYRQG IQDAEVLQNH TRPELVSLAY
TAMHGVGAEM AETVLKDAGV SQVYSVAAQR EPDGDFPTVN FPNPEEKGAM DLVIAEATKH
DAMLACANDP DADRFAVAVR KRAGDYQMLT GDQVGVLFGH YLLKHASKEQ RLTCTTIVSS
SLLSKVAASM GARCITTLTG FKWLMNVAIA EQTPDNRFLF AYEEALGYTV GDMVWDKDGL
SALVAFSQLT AELASKGETI WDRLADIYKE HGFHLNAQVS IALKPDTPNI GAYLREHPPV
TVAGRKVLSV DDISCGERRF ADGRLETIAL PLSDVLIYSL EGGARVIVRP SGTEPKIKCY
YEVVEIMGID DSLETAQLRA RAQMDKFIEA HQASLPK