| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3142 |
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| Symbol | |
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| ID | 6117461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3851089 |
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| End bp | 3851787 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634687 |
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| Product | helix-turn-helix type 11 domain-containing protein |
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| Protein accession | YP_001761508 |
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| Protein GI | 170727482 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.92923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGTG CCGATCGGTT ATTCCAGATA GTACAGATCC TCAGAAGCAG ACGATTAACC
ACTGCGCAGC AGCTTGCAGA GCGACTGGAG GTATCTACTC GTACTGTTTA TCGTGATATT
CAAGACCTCA GCCTAAGTGG GATTCCTATT GAGGGAGAAG CAGGAGTGGG CTACCTACTA
CGCCAGGAGG TTAATGTTCC GCCCTTGATG TTCAATGAAG CTGAACTTGA AGCGATTCAA
GTGGGCATGC GTATGGTTCA GGCTTGGGGA GGGGAGGAGT TGTCAAGTGC TGCCAAGCAA
GCGATGATAA AGGTTGAAGC CGTACTGCCA TCAAGGTTGC AAGAGTATCA GTCACTCATG
TTTGCGCCTG ATTTCTATAT CGATAATGAC GAGTTTAAGT TTCTGGATAT GCTGAGAAAG
TCTTCACGTT TACGTGAGTA CCTTTTAATG GATTACCGAG ATGCTAACGA GGAGGCCACT
CAAAGAGAGA TAAGGCCTCT TGCCATCTAT TTTTGGAAAG GGATCTGGAC CTTGTTGGCC
TGGTGTGAAT TAAGAGCTGA CTTTCGTAAT TTCAGAGTCG ATAGAATTAT TCATCTGACA
AAGTTAGAAC GACACTTTGC CGTGTCGCCA GGAGAGGAGA TGCATGACTA CATTGCATTA
ATGGAAGTGA AGTACGGAGA TGAAAGTAAG AAAAAGTAG
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| Protein sequence | MRRADRLFQI VQILRSRRLT TAQQLAERLE VSTRTVYRDI QDLSLSGIPI EGEAGVGYLL
RQEVNVPPLM FNEAELEAIQ VGMRMVQAWG GEELSSAAKQ AMIKVEAVLP SRLQEYQSLM
FAPDFYIDND EFKFLDMLRK SSRLREYLLM DYRDANEEAT QREIRPLAIY FWKGIWTLLA
WCELRADFRN FRVDRIIHLT KLERHFAVSP GEEMHDYIAL MEVKYGDESK KK
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