Gene Swoo_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3141 
Symbol 
ID6117460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3850734 
End bp3851075 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content42% 
IMG OID641634686 
ProductNIPSNAP family protein 
Protein accessionYP_001761507 
Protein GI170727481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.630822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA AAAACAACCT TGAACAGATG CCAATGAAGG TGACCTGTCA TGTGAAATAT 
ATCATCGACC CAGATATGCT CAGTGAATTT GAACACTATG CCAAGCTCTG GATCCCTCTG
GTTGAAAAAT TTGGCGGACA ACACCACGGA TACTTTCTAC CCAGTGAGGG CGCCAATGAT
GTTGCTATTG CCCTCTTCTC CTTCCCAAGC CTAGCGGATT ACGAGGTCTA TCGACATGAA
TCAGCTCAGG ATGTTGATTG CCTTTCCGCA TTTTATTACG CTAAAAAACA TAAGTTTATT
CTTAGATATG AACGTAGCTT TATGCGTCCA GTTCTTGAAT AA
 
Protein sequence
MTSKNNLEQM PMKVTCHVKY IIDPDMLSEF EHYAKLWIPL VEKFGGQHHG YFLPSEGAND 
VAIALFSFPS LADYEVYRHE SAQDVDCLSA FYYAKKHKFI LRYERSFMRP VLE