Gene Swoo_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3140 
Symbol 
ID6117459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3850418 
End bp3850720 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content41% 
IMG OID641634685 
Productbranched-chain amino acid transport 
Protein accessionYP_001761506 
Protein GI170727480 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTGGT TAACTATCAT CACCATGGCC ATACTCGTTT TTGGCAGCCG CTACCTTTTT 
CTTGAACCTA AGTTACCTGT CAGGTTAAGT AAAAACACCC TAACATTTTT AAGTTACTCA
GCCCCCGCAG TACTCACCGC CATATTTGCA CCAATTGTCT TTATACGGGA AGGAGAGCTA
GCCTTAAGCT TAGATAATAG CTATTTGATT GCAGCTGTAC TGGCTGCATT GCTGGCATAT
ACCACTCGAA ATATCCTTTT AACCACAGTA GTAAGCATGG GTCTATTTTT TATCATTCAC
TAA
 
Protein sequence
MIWLTIITMA ILVFGSRYLF LEPKLPVRLS KNTLTFLSYS APAVLTAIFA PIVFIREGEL 
ALSLDNSYLI AAVLAALLAY TTRNILLTTV VSMGLFFIIH