| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3133 |
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| Symbol | |
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| ID | 6117452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3842434 |
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| End bp | 3843792 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634678 |
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| Product | gluconate transporter |
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| Protein accession | YP_001761499 |
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| Protein GI | 170727473 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00517541 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCAAG TACTTATCTT GTTGGCAGTG ATACTCTTCA TTGTTATTGC CACCTCAAAA
TTTAAATTAC ATCCATTTTT AACACTGATT TTAGCCTCCT TCATCACCGC GTTTGCCTAT
GGCCTCCCCA GTGCAGACAT TGCCAAAACC ATCACCAGCG GATTTGGTGG GATCTTAGGA
TATATTGGGT TAGTGATCGT ACTAGGTACC ATCATAGGAA CCATACTGGA AAAAAGCGGC
GCCGCTATCA CCATGGCCGA TGTGGTCATA AAAGTGCTAG GTAAACGCTT CCCCACTCTC
ACCATGTCGA TAATCGGTTA CTTGGTTTCT ATCCCAGTAT TTTGTGACTC TGGCTTTGTG
ATCTTAAACT CACTAAAACA GTCGATGGCT AATCGTATGA AGGTCTCGAG CGTCTCTATG
AGTGTCGCCC TTGCCACAGG CCTGTACGCC ACCCATACCT TTGTGCCGCC CACACCGGGC
CCGATTGCTG CTGCGGGTAA TTTAGGCCTT GAATCAAACT TAGGTTTAGT GATCTTTGTA
GGCGTATTTG TTGCTGCAAT TGCAGCACTT GCCGGTACCC TATGGGCAAA CCGCTTCGCT
AATGTCGAAC CTGACGGTGA AGGCGCTGAG GAGCTAAAAA CTCAGGTTGA GGAGTTTGAT
AACCTAAAAG CGGCCTACGG CACATTGCCA AGTCCAACTA GTGCATTTGC ACCGATATTC
GTGCCTATCT TACTTATCTG TTTCGGCTCT ATCGCTAACT TCCCGTCATC TCCATTAGGC
AACGGTTTAA TGTTCGACGT GCTGGCTTTC CTAGGTCAGC CAGTCAATGC ACTCATGATA
GGTCTGCTAC TTTCTGTTTC ACTGCTTAAA AGCAGCGATA AAATCAGAGA GTTCAGTGAG
CGTATCAGCC AAGGTTTAGT CGTTGCTGCG CCCATTCTAT TAATCACAGG GGCAGGTGGT
GCATTCGGTG CAGTCCTTAA AGCCACAGAG ATAGGTAACT TCCTAGGCAC ATCACTCTCG
GCACTTGGGA TCGGGATCTT TATGCCATTT ATCGTGGCTG CTGCATTAAA GTCAGCCCAA
GGCTCATCAA CAGTAGCCTT AGTTGCAACA TCTGCACTCG TTGCCCCAAT GCTCGGCGAT
ATTGGCCTGG CAAGCGATAT GGGACGCGTA CTAACGGTTA TGGCTATTGG TGCAGGCGCG
ATGACCGTCT CTCACGCCAA TGACAGCTTC TTCTGGGTCG TCACTCAATT TAGCCGCATG
AGTGTTAAAC AGGCCTATAA AGCACAAACC GTGGCAACAC TTATCCAGGG CCTGACTGCA
ATGACGTTAG TGTTTATCCT GAGCTTAGTG CTACTTTAA
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| Protein sequence | MSQVLILLAV ILFIVIATSK FKLHPFLTLI LASFITAFAY GLPSADIAKT ITSGFGGILG
YIGLVIVLGT IIGTILEKSG AAITMADVVI KVLGKRFPTL TMSIIGYLVS IPVFCDSGFV
ILNSLKQSMA NRMKVSSVSM SVALATGLYA THTFVPPTPG PIAAAGNLGL ESNLGLVIFV
GVFVAAIAAL AGTLWANRFA NVEPDGEGAE ELKTQVEEFD NLKAAYGTLP SPTSAFAPIF
VPILLICFGS IANFPSSPLG NGLMFDVLAF LGQPVNALMI GLLLSVSLLK SSDKIREFSE
RISQGLVVAA PILLITGAGG AFGAVLKATE IGNFLGTSLS ALGIGIFMPF IVAAALKSAQ
GSSTVALVAT SALVAPMLGD IGLASDMGRV LTVMAIGAGA MTVSHANDSF FWVVTQFSRM
SVKQAYKAQT VATLIQGLTA MTLVFILSLV LL
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