| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3132 |
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| Symbol | |
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| ID | 6117451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3841073 |
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| End bp | 3842137 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634677 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001761498 |
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| Protein GI | 170727472 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00437573 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCCAA CTCTTCTTGT CTGCTTTACC CTTCTATTAT CTCCCCTTAT CTGTCATGCA
GTCCAACTTA GCGACTATGA TGCGGATGTT GCCGCCCTGC TGCTTGAGTA TCAAGGAGAT
GGTGACGTTG CAGCGCTACT TAGGAAGTAT CAGGGAACCA CTGCAAGCTC AGCCATGGCA
AGGCCATCGG TACTCACCAT CAAAGAGCAA GGTGACGCCA GCACCTATGT GGATTTCGAG
CGGGGTATCA TCTTAATCGA AACTCCAGAC AAAGCTTTGC TGAAAGAAGC TATCGTGCAG
GTTTTACTCA CTCAAATTGA CCCTAAGCTT ATCGACGCTA AAACTGCTCA AGACTTTGGT
TTAATCAATA AGGGAAAGAA GCCTTTTTTC TGGGGACAAA TACACGATCA TCAAGGAGAA
GCAATTGAGT ACTCCTGGCG GGCAGAGCGT TTTGCGGATT ATCTCATCAA GCACAAGCTC
AGCCAAGACA GTCGTGTCAG AGTCGCCATA CATATGGTAG CCGAACATAC CAAGATAGCT
GGAGGGAAAT ATATTCACTA CGCTCAAGCC GCAAGCCGAC GTTATGGAGT ATCAACCGAA
CTCATAATGG CCATTATGGA AACGGAAAGC TCATTTAACC CTATGGCCAG ATCCCGCTCT
AACGCCCTAG GCTTAATGCA GGTCAAAGCC AATACCGCGG GACGTGATTA CTTCTCTTTA
ATTAAGGGTT ACAAACACAC CCCCTCTTCT GCATACCTTT ATGATCCACA AAAAAATATC
GATCTTGGTA CTGGTTACCT ACAGATATTA TCAAAGCGCT ATTTAGCAGG CATTAATCAT
CCTAAAAAAC TGGAGTATGC CATGATCTCA AGCTACAACG GTGGCAGCGG CAACCTATGG
AAAAGTTTAG ATCCTCAAGC AAATCGCACT AAAGCGATAG CCCGGATCAA TAAGATGAGT
GTTAGCGAGT TTTATTGGTT TCTCACCAAC AGACATATCA GGGGAGAGAC CCGCAACTAC
TTAAAAAAGG TTAGCAGTAA ACAAAAGAAA TATGCTCACC TGTAA
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| Protein sequence | MKPTLLVCFT LLLSPLICHA VQLSDYDADV AALLLEYQGD GDVAALLRKY QGTTASSAMA
RPSVLTIKEQ GDASTYVDFE RGIILIETPD KALLKEAIVQ VLLTQIDPKL IDAKTAQDFG
LINKGKKPFF WGQIHDHQGE AIEYSWRAER FADYLIKHKL SQDSRVRVAI HMVAEHTKIA
GGKYIHYAQA ASRRYGVSTE LIMAIMETES SFNPMARSRS NALGLMQVKA NTAGRDYFSL
IKGYKHTPSS AYLYDPQKNI DLGTGYLQIL SKRYLAGINH PKKLEYAMIS SYNGGSGNLW
KSLDPQANRT KAIARINKMS VSEFYWFLTN RHIRGETRNY LKKVSSKQKK YAHL
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