| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3121 |
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| Symbol | |
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| ID | 6117440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3822853 |
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| End bp | 3824523 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634666 |
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| Product | glutaminyl-tRNA synthetase |
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| Protein accession | YP_001761487 |
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| Protein GI | 170727461 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000496067 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCATC TGGACAGCGA AGTTCGTCCT AGTAACTTCA TTCGTAATAT CATAGATGAA
GATCTTGAAA GCGGTAAGCA TGAGAGTGTG CATACCCGTT TTCCACCTGA GCCTAATGGC
TTTCTTCATA TCGGCCATGC AAAATCTATC TGCTTAAACT TCGGTATAGC AAAGGATTAC
AAGGGCCAAT GTAACTTACG TTTCGATGAC ACGAATCCTG AGAAAGAAGA TATCGATTAT
GTTCATTCTA TTCAGGATGA TGTGAAGTGG CTTGGTTTTG ACTGGGATGG CGATATTCGC
TACTCATCAA ACTATTTTGA CCAGTTACAT AAGTATGCGA TTGAGTTGAT CGAGAAAGGC
TTAGCCTATG TCTGTTTCCT TAATGGGGAA GAGACTCGCG AGTATCGCGG CACACTTAAA
GCGCCTGGAA AGAACAGTCC TTATCGTGAC ACATCAGTAG CTGAGAACCT CGAGCTATTT
GAAAAGATGC GTAAAGGTGA GTTCAAAGAG GGAGAGTGTT CTCTTCGAGC TAAAATCGAC
ATGGCATCAT CATTTATGTG CATGCGTGAT CCGATAATCT ATCGTGTCCG TTTTGCTCAT
CACCATCAAA CTGGTGATAA GTGGTGTATC TATCCTATGT ACGATTTTAC TCACTGTATC
TCAGATGCGA TTGAGAACAT CAGTCACTCA CTTTGTACAT TAGAGTTTCA GGATAATCGC
CGTTTGTATG ATTGGGTATT GGATCACTTA GATGATTTCC AAGCGCCAAA TCGTACTCGT
CAGTATGAGT TTTCTCGTCT AAACCTAGAG TACACCTTGA TGTCTAAGCG TAAGCTTAAC
GATCTTGTGA CTCGTAAATT GGTTAATGGC TGGGATGACC CACGTATGCC GACCATTGCA
GCGCTTCGTC GCCGTGGTTA TACGCCGTCG GCTATCCGTG AGTTCTGTTT ACGCATTGGC
GTAACTAAGC AGGACAACAT GGTAGAAGTT GGAATGTTAG ATGCGTGTAT CCGTGAGGAG
CTTAATGACA AAGCGCCTCG TGCAATGGCT GTGATCAACC CTGTTAAGGT GATAATCGAG
AACTACCCAG AAGGTCAAAT TGAAACCTTG AGCGCACCAA TACACCCAAC TAATGAAGAG
ATGGGCAAGC GTGAATTGGC TTTTGGTCGT GAACTTTATA TCGATGCTGA TGACTTCCGT
GAAGAAGCGA ATAAGAAGTA CAAGCGTCTG GTTCAAGGCA AAGAGGTGCG TTTACGTAAC
GCTTATGTCA TTAAAGCAGA GCGTTGTGAT AAAGATGCCG ATGGCAATGT CACTACTATC
TACTGTAGCT ATGATGATGA GACGCTAGGT AAGAATCCAT CAGATGGGCG TAAAGTAAAA
GGGGTTATCC ATTGGGTTGA AGCAACATCT GCTAAACCTG CAGAGTTCCG CCTTTACGAT
CGTCTGTTTA CCGATGCTAA CCCAGCGGCT GCTGAGACTG TCGATGAGGT ACTTAACCCA
GACTCTCTGG TTGTAGCTCA TGGTTTCGTT GAAGCAGGTC TTGTGGCTGC AGAAGCTGAA
AAAGCATATC AGTTTGAGCG TGAAGGCTAC TTCTGTGCAG ACAATAAAGA TTCAACACCA
GAAAACTTGG TATTCAATCT AACCGTTGCA TTACGAGACT CTTCTCAGTA A
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| Protein sequence | MSHLDSEVRP SNFIRNIIDE DLESGKHESV HTRFPPEPNG FLHIGHAKSI CLNFGIAKDY
KGQCNLRFDD TNPEKEDIDY VHSIQDDVKW LGFDWDGDIR YSSNYFDQLH KYAIELIEKG
LAYVCFLNGE ETREYRGTLK APGKNSPYRD TSVAENLELF EKMRKGEFKE GECSLRAKID
MASSFMCMRD PIIYRVRFAH HHQTGDKWCI YPMYDFTHCI SDAIENISHS LCTLEFQDNR
RLYDWVLDHL DDFQAPNRTR QYEFSRLNLE YTLMSKRKLN DLVTRKLVNG WDDPRMPTIA
ALRRRGYTPS AIREFCLRIG VTKQDNMVEV GMLDACIREE LNDKAPRAMA VINPVKVIIE
NYPEGQIETL SAPIHPTNEE MGKRELAFGR ELYIDADDFR EEANKKYKRL VQGKEVRLRN
AYVIKAERCD KDADGNVTTI YCSYDDETLG KNPSDGRKVK GVIHWVEATS AKPAEFRLYD
RLFTDANPAA AETVDEVLNP DSLVVAHGFV EAGLVAAEAE KAYQFEREGY FCADNKDSTP
ENLVFNLTVA LRDSSQ
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