| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3109 |
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| Symbol | |
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| ID | 6117425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3807476 |
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| End bp | 3809335 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634651 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001761475 |
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| Protein GI | 170727449 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000348858 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000060064 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAGAGA AGATTCGCGA AGGCTCACAG GGCGTGATTG CAAAAAGCAT TCTGGTTCTA
GTGATACTTT CCTTTGCATT TACTGGCGTG AGTAGCTATT TAGGTTCATC GACAGAGGCT
GCTGCAGCTA CTGTTAACGG TGAAGAGATC AGTGAATCAG CTTTGGAACA GGCCTATCAA
AGTGAACGTG CTCGTTTAGA GCAACAATTA GGCGAGATGT TTGAAGCACT GGCTGCTGAT
GACAGTTATT TAGCCAGCGT AAAGCAGAGT GTTTTAGAGC GTCTTGTTGC TGAAAAACTA
CTGGATCAGA GCGCGACTGA ACTCGGTTTG CGTGTGTCTG ATGAGCAGAT TAGAACGGCA
ATTATGACTG AGCCTGCATT TCAAACTGAT GGAAAGTTTG ATAATGATAG ATATCAAGCA
ATCCTTCGTC AGTTAGGTTA CCAAGCCAAC TCATTCAGAG ACATGATGCG TACCGATATG
ACTCGTCGCC AGTTGGTTGC CTCTTTAGTT GGTTCTGAGT TTGTATTGCC TAGTGAAGCC
GATTACTTGG CTGGAATTCA AGGGCAAACA CGCGATATTC GCTATCATGT TATTGATGCC
ACTCCTTATA TCGCTCAGGC CGTAGTATCT GATGAAGATG CTAGAGCTTT TTATGATGCC
AACCTAGCTC AGTTCATGAG TCCAGAAACC CTTAGCCTTG AATATATTGA GCTTAATGCA
AAAGATATGG CAAACGACGT GGTAGTGACC GATGAAGAGG CACAAACTTA TTATGACGAG
AATAAGCAGC AGTATCTAAA GCCTGAAAAG CGTTTAGCTG CGCATATTCT TGTTAACTTA
GGTGATGATG AGTCAGCGGC GAAAGCAAAA GCTGATGCTA TCTACGCTAA GTTGCAGGCA
GGTGAAGAGT TCGCTGAATT GGCCAAAACA GAATCTGAAG ATACCTTTAG CGGTGAGCAA
GGTGGACAGC TGGATTGGTT TGAGAAAGGG GTGATGGAGC CAGAGTTTGA TGACGTGCTC
TTCTCTCTTT CAAATGGTGA ATACTCAGCC GTAGTTAAGA CGAGCTTTGG CTACCACATC
ATCAAGTTAC TTGATCTACA GCCTGGTGCC GAAGCGCCAT TTGAAGACGT CAAAGCTAAA
ATACTTGCTC AGCTTAAAGA GAAGCATGCT ATCGATACGT ATTTCGGCCT ACAGCAAACA
TTAGCAGACG TCAGTTACGA AGTACCTGAT ACGTTAAGTG AAGCTGCGAA AGAGTTAGGT
GTTGAAGTGC AAACGACACC TGTATTTGCA AGAAACAGTG CGCCAGCTCC TTTCGATAAG
CCTGATGTAT TAAAAGCGGC GTTTTCAGAC AGTGTTCTAC TCGATGGTAT GAACAGTGAT
GTGATTGAGG TTGATGCTAA TCACGCTATG GTGATCCGTA TTAAGTCTCA CACGGCTGCA
GGAACGGTTG CTTTTGATAA AGTGAAATCA GGTATTGTTC AGCGACTACA GCAGGAACAA
GCTAATGAGG TTGCTAGAGA GCAGGCTCAG GAGCTGATGA CAGCTTTCCC TAGTACTGAG
GTTGAGTTTG TCACTAAGAC AAATGCAGGG CGTTTTGAGC AAGATATTGA TGGCGCTATC
ATCAACAAGG CATTCCAGAT GGCTCAGCCA GCGGACAGTG CTGTTGTTGA TACCGTAGCA
CTTGCTTCTG GTTATGCAGT GATTGTGCTT GATAAAGTCA ATGCAGCTCA AGGCATCGAT
GAGAACATGC TAGGTGCACT TAAGCAGCGA CTTAATGCCC AATACAGTGA AGGCAGTTAC
CGTGCGCTTA TCGCAACACT AAAAGCTAAC AGTGAAGTGG TTTACTCATC TGTACAATAA
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| Protein sequence | MLEKIREGSQ GVIAKSILVL VILSFAFTGV SSYLGSSTEA AAATVNGEEI SESALEQAYQ
SERARLEQQL GEMFEALAAD DSYLASVKQS VLERLVAEKL LDQSATELGL RVSDEQIRTA
IMTEPAFQTD GKFDNDRYQA ILRQLGYQAN SFRDMMRTDM TRRQLVASLV GSEFVLPSEA
DYLAGIQGQT RDIRYHVIDA TPYIAQAVVS DEDARAFYDA NLAQFMSPET LSLEYIELNA
KDMANDVVVT DEEAQTYYDE NKQQYLKPEK RLAAHILVNL GDDESAAKAK ADAIYAKLQA
GEEFAELAKT ESEDTFSGEQ GGQLDWFEKG VMEPEFDDVL FSLSNGEYSA VVKTSFGYHI
IKLLDLQPGA EAPFEDVKAK ILAQLKEKHA IDTYFGLQQT LADVSYEVPD TLSEAAKELG
VEVQTTPVFA RNSAPAPFDK PDVLKAAFSD SVLLDGMNSD VIEVDANHAM VIRIKSHTAA
GTVAFDKVKS GIVQRLQQEQ ANEVAREQAQ ELMTAFPSTE VEFVTKTNAG RFEQDIDGAI
INKAFQMAQP ADSAVVDTVA LASGYAVIVL DKVNAAQGID ENMLGALKQR LNAQYSEGSY
RALIATLKAN SEVVYSSVQ
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