| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3104 |
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| Symbol | |
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| ID | 6117420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3802577 |
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| End bp | 3803467 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634646 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001761470 |
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| Protein GI | 170727444 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0757763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000231054 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTCAAA TTAAGATCTA TCAGGGAGAT GAGATCCCCT CCCCCATGCT CAAGATCTGG
CACACTTTTG CAGATAATCC ATTTGCATTT GCTGGTTTAT GGGCTGTTGT TGGTTTTCTT
CTACTGGCCG TTTTTGGTCC GTTTATCGCA CCCTACTCAC CTGAACACCA AGATCCCCAT
GCGCTACTTC TAGCGCCATC TTGGGATCCT GCAGGGACAG TCGAACACTT TCTTGGAACC
GACGATCTAG GTAGGGATAT CTTTAGCCGT CTCCTTCATG GCGCGCACCT CACCTTTGGT
GTAGCACTCG GAATTGTATT GACCTCACTG GTACTTGGTT TCATCATAGG TTCAATCTCC
GGCATGATGA AAGGGCTAAA ATCCAGTATT TTGAGCCATC TTCTCGATGC TCTACTCTCT
ATTCCCTCTC TGTTAATGGC TATCTTGGTT GTGGCTGTTA TGGGTCCGGG ACTTAATAAT
GTATTTTGGG CGGTGGGGAT CGCACTGACC CCCCAGTTTG TTCGTGCCAT ACATCAAGCG
ATACATGAAG AACTTCAAAA AGAGTATGTC AAAGCGGCAA AACTTGATGG TGCTAACCCC
ATTCAGATAT TTTGGTATGT CATCATGCCA AATGTCTGGG ATACGGTTAT CATCCAAACG
ACCTTAGGGA TCTCTGCGGC GATATTGGAT ATTGCTGCGC TAGGCTTTCT AAATTTAGGG
GCTCAAGCAC CGAGTCCAGA GTGGGGGGCG ATGGTATCTC AGGGAATGGA TAACATTTTA
ACAGCGCCTT GGACTGTAAC AATTCCAGGT GTAGCCATTC TGTGTAGCGT TCTTGCAATT
AATTTAGTCG GTGACGGCTT ACGGTCGGCA CTGTCGCCGA TCAATAACTA A
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| Protein sequence | MPQIKIYQGD EIPSPMLKIW HTFADNPFAF AGLWAVVGFL LLAVFGPFIA PYSPEHQDPH
ALLLAPSWDP AGTVEHFLGT DDLGRDIFSR LLHGAHLTFG VALGIVLTSL VLGFIIGSIS
GMMKGLKSSI LSHLLDALLS IPSLLMAILV VAVMGPGLNN VFWAVGIALT PQFVRAIHQA
IHEELQKEYV KAAKLDGANP IQIFWYVIMP NVWDTVIIQT TLGISAAILD IAALGFLNLG
AQAPSPEWGA MVSQGMDNIL TAPWTVTIPG VAILCSVLAI NLVGDGLRSA LSPINN
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