| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3103 |
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| Symbol | |
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| ID | 6117419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3801559 |
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| End bp | 3802590 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634645 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001761469 |
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| Protein GI | 170727443 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.419421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000256844 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCGTT ACCTTTTAAG AAGACTTAAC CTCTTTCTGG CGACCTCATT AGTGCTGTTT
GCCGTACTCT TTATGGTCAC CAGTCAGTTT CCCGTTGAGC AAAGGTTCGC CCTTACCGGA
ATTCAGTCCC CAAGTGCAGA GCAGATAACC CAAATAGAGG AAGACTACAA ATTAAACAGT
GGTAAATTCA ATCAATTTAT CGCTTACCTG CAGCAAAGAC TTGGCGGAAA CCTTGGTATC
TCTGCCACCT CACAGCGCCC TGTTGCAGAT GAGTTAGCAT CGGTGCTGCC TGCCTCATTT
GAGCTAGCTG CCGTGGCAGG TTTTTTAGCA CTGGCATTTG GATTACCACT TGGGATTTTA
GCATCACTTA GTCGACATAA AGTCACCCAA CATACCATTA TGGCCATCAC GTTAACGGGC
TACTCTATCC CAGTGTTCTG GCTTGGACTC ACTCTCTCGT TGTGGTTTGG CGTACAGTTA
GGCTGGTTAC CTATTTCAGG CAGACTTAAT CTGCTCTATG AGATAGAACC TGTCACAGGC
TTTATTCTTA TTGATACCTT AATATCCAGC TCTCCCTATA GCACCTCGGC TTTCCTTGAT
GCTCTGCTGC ACATTATTTT GCCCGCAGTG ACACTGGCAG TCTTACCTTT TACAGTTGTA
GTTAGGATCA CCCGCGCAGC CATGATATCC ATTATGGAGC AAACCTATAT CAAAGCTGCA
GAGGCCAGAG GATTACACAC TTCACGAATT GTACTGCGTC ATGCTCTGCC CAATGCGTTG
ATCCCTGTGA TTAAAAACCT AGGGTTAATG CTAGGCACAT TTGCCAGTTA CGCCATCGTA
GTAGAGGTGA TCTTCTCATG GCCTGGCGTC GGCGCTTGGT TAGTTTCGGG AATTTATCAA
CGTGACTACA CTGCAATACA GGGAGGTGTG CTTGCCGTGG CATTAATCAT CATCTTCTTA
AGTATTATGA TAGAGGTCTT ACACACGACC ATGAACCCCT TGAGCAGGAA AGAACTCTAT
GCCTCAAATT AA
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| Protein sequence | MARYLLRRLN LFLATSLVLF AVLFMVTSQF PVEQRFALTG IQSPSAEQIT QIEEDYKLNS
GKFNQFIAYL QQRLGGNLGI SATSQRPVAD ELASVLPASF ELAAVAGFLA LAFGLPLGIL
ASLSRHKVTQ HTIMAITLTG YSIPVFWLGL TLSLWFGVQL GWLPISGRLN LLYEIEPVTG
FILIDTLISS SPYSTSAFLD ALLHIILPAV TLAVLPFTVV VRITRAAMIS IMEQTYIKAA
EARGLHTSRI VLRHALPNAL IPVIKNLGLM LGTFASYAIV VEVIFSWPGV GAWLVSGIYQ
RDYTAIQGGV LAVALIIIFL SIMIEVLHTT MNPLSRKELY ASN
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