| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3100 |
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| Symbol | |
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| ID | 6117416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3797883 |
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| End bp | 3798572 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641634642 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_001761466 |
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| Protein GI | 170727440 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.640678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000229067 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGAATTT TCTCTCGCTT CGCAGATATC ATTAATTCAA ACATCAGCTC ACTACTTGAT
AAGGCTGAAG ATCCAGAAAA AATGGTACGC CTAATTATTC AAGAGATGGA AGACACTTTG
GTGGAGGTTC GTTCTACTTC AGCTAAGGTA CTCGCTGAGA AAAAAGAGCT ACTTCGTCGT
ATCGCTAAGG TACAGGAGCA AGTTCAAGAT TGGCAGAGCA AAGCTGAGCT AGCCTTATCA
AAAGATCGTG AAGATTTGGC AAAAGCAGCA CTGATTGAAA AGCAGAAAGC TACTGAACTG
GCTGCAACAT TAACTCAAGA GCTAGTGGTT GTTGAGGAGC AGATCACCCG TCTTAAAGAT
GAGGTTAACT TGCTACAGGA GAAGTTAGCT GATGCTAAGG CTCGTCAAAA GACTATTATT
ATGCGCAAGC AGACTGCGAG TTCACGTTTA GAGGTGAAGA AGCAGCTTGA TTCGAGCAAG
ATTGATAATG CGATGAACAA GTTTGAGCAG TATGAACGTC GTGTTGAGAG TTTAGAGTCT
CAAGTTGATG CTTATGACTT AGGCAACCAG AAAAATCTGA ATGATGAGTT TGCCGCTTTA
GAAGCTGAGG ATTCAGTATC TGCTGAGCTT GAAGCCTTAA AAGCTAAAGT AAGTGCTAAC
AAATCAAAAG CGAAAACAAA AACAAAATAG
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| Protein sequence | MGIFSRFADI INSNISSLLD KAEDPEKMVR LIIQEMEDTL VEVRSTSAKV LAEKKELLRR
IAKVQEQVQD WQSKAELALS KDREDLAKAA LIEKQKATEL AATLTQELVV VEEQITRLKD
EVNLLQEKLA DAKARQKTII MRKQTASSRL EVKKQLDSSK IDNAMNKFEQ YERRVESLES
QVDAYDLGNQ KNLNDEFAAL EAEDSVSAEL EALKAKVSAN KSKAKTKTK
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