| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3098 |
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| Symbol | |
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| ID | 6117414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3797165 |
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| End bp | 3797563 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634640 |
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| Product | phage shock protein C, PspC |
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| Protein accession | YP_001761464 |
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| Protein GI | 170727438 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | [TIGR02978] phage shock protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.215712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000191033 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTAAAG CAGATGGCCG CACCCTATAT CGTATCCCCC AGTCAGGTAA AGTTGCCGGT
GTCTGTGCAG GAATAGCCGA CTACTTTAAT TTCGAAACTT GGCTGGTCCG TGTCGCAGCT
GCATCGATTT TCCTTTTAGG GGGAGGCGGT CCAGTATTAT TCATCTACAT CTTATTGTGG
GTAATATTGG ATGCAAAACC CGGTACTGAG AAGTCAGATG CGAAAGTGAA GAAAGATATC
GAGATTAAGA AGAAGGTTTG GCAAGCGGGA GAACCAGCGA AGATGGCACT TCGTGATGTG
AGTGAAAACT TTAGAGCCCT AGAAACTAGA CTTCAAAAGT TGGAACGTCA CGTTACATCT
GATAACTTCG ATCTTAAACA AGAGATCAAT AATCTTTAA
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| Protein sequence | MSKADGRTLY RIPQSGKVAG VCAGIADYFN FETWLVRVAA ASIFLLGGGG PVLFIYILLW
VILDAKPGTE KSDAKVKKDI EIKKKVWQAG EPAKMALRDV SENFRALETR LQKLERHVTS
DNFDLKQEIN NL
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