| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3097 |
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| Symbol | |
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| ID | 6117413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3795662 |
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| End bp | 3797116 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634639 |
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| Product | protein of unknown function DUF463 YcjX family protein |
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| Protein accession | YP_001761463 |
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| Protein GI | 170727437 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3106] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.25777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000036158 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTCGTA TTAATCGCTC TTTTTCTAAG TTAAGCAAAA AAGTTTCCCA CACTACAAAA
GCCCTTGCCC ATAGAACCTC TGACAGACAC ATCCGTCTTG CTGTTACAGG CCTTTCTGGT
GCAGGTAAAA CGGCTTTTAT CACTGGGCTT GTGGACCAGC TATTAAACTC AGGTGTAATT
GGGGAGAGTA ACCAATTACC TCTATGGCAG GTGAGCCGTG AAGCGCGCTT ATATGGTGTA
AAGCGGGACC TACAACCAGA TTTAACCGTC GCAAGTTTTG ATTATGAACA GGCGATGAGT
GCATTAAGAT CTTCTCCACC ACATTGGCCA GCATCGACAC GAAGTATCAG TGAGTTGAGA
CTCGCGATAC GCTACCAACC CGAAAAGGGC ATATTGGCTA AACTGACCGA TAGTGCAACG
CTCTATCTTG ATATTGTTGA TTATCCTGGG GAGTGGCTGC TTGATCTGCC CATGTTAAAG
CAGACATATC GTCAGTGGTC AGTGGTGCAG AGTCAACGTG AGCAGGTGTT GAAAAGCTCA
AGCTACTATC CAGCCTTTTC TGAAGCACTT GCTGGGCTCA ATCTCTCGGC TAAAGCCGAT
GAGGCTGAGT TAAAACAGAT AGCGGCCTTG TATCAGCAGC TGCTTTTAGA CAGTGTGAAT
AATCACGGAT TTTATTATGC TCAGCCAGGG AGAATGTTAC TTCCCGGTGA GTTAGCCGAT
GCACCAGTAC TGGCCTTTTT CCCCCTATTT GGTCTATCTG ACAGCGTGCT CGCTGAGCGC
GAGAAAGATG ATGTAGACTC AGCTTATCAC GTGCTGATGA AGCGTTTTGA TGAGTACAAA
GCCAAAGTGA TCACTCCCTT TTACAAGGAG TATTTTGCCC AGTTTGACCG CCAAATTCTT
TTGGTGGATT GTTTTACCCC TTTAAATAGA GGTAAAGCGC AGTTTGATGA TATGACTCAG
GCTCTTAACG GCATCATGGA GAGCTTTAAG TTTGGCCAGT CTAACCTATT AAAGCGCTTG
TTTTCCCCGA GAATAGATAA GTTACTGTTT GCCGCGAGCA AGGTGGATCA TATCACTCGG
GATCAACAAG GTAATGTGCT TTCATTGCTC ACTCAATTGG TTAAGCAGAG TCAGAAGCAA
GCCAAGTTTG AGGGCTGTGA TGTTGAGGTG ATGGCAATCA GTGCGATTAA AGCCACCAAA
CATGCCATGG TCAAATCGGG AAGCACAGAG GTCGAAGTTG TTCATGGACG AGCGCTGTCC
ACTGGAGAGC CTGTTACCTT ATATCCTGGT GAAGTTCCTA GAAACCTGCC TAAAAGTGAA
TTTTGGGATA CTCAAGGTTT TGACTTTATG CAGTTTGCTC CTCCGCTCAT TGAAGCTGAA
ACCGAGGGAG CCGATTTTAG CCATATTAGG CTAGATCACC TTTTACAATA TATTTTGGGT
GACAAATTAA GATAA
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| Protein sequence | MSRINRSFSK LSKKVSHTTK ALAHRTSDRH IRLAVTGLSG AGKTAFITGL VDQLLNSGVI
GESNQLPLWQ VSREARLYGV KRDLQPDLTV ASFDYEQAMS ALRSSPPHWP ASTRSISELR
LAIRYQPEKG ILAKLTDSAT LYLDIVDYPG EWLLDLPMLK QTYRQWSVVQ SQREQVLKSS
SYYPAFSEAL AGLNLSAKAD EAELKQIAAL YQQLLLDSVN NHGFYYAQPG RMLLPGELAD
APVLAFFPLF GLSDSVLAER EKDDVDSAYH VLMKRFDEYK AKVITPFYKE YFAQFDRQIL
LVDCFTPLNR GKAQFDDMTQ ALNGIMESFK FGQSNLLKRL FSPRIDKLLF AASKVDHITR
DQQGNVLSLL TQLVKQSQKQ AKFEGCDVEV MAISAIKATK HAMVKSGSTE VEVVHGRALS
TGEPVTLYPG EVPRNLPKSE FWDTQGFDFM QFAPPLIEAE TEGADFSHIR LDHLLQYILG
DKLR
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