| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3085 |
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| Symbol | |
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| ID | 6117400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3780438 |
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| End bp | 3782861 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634627 |
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| Product | DNA polymerase II |
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| Protein accession | YP_001761451 |
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| Protein GI | 170727425 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000404512 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000370941 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAGAG AAGAGTCCCT CCCAGCGAGT GTTAAAGGCA GAGTGCTATC ACGGCATCTG
GTGCAACAAT CGGGCGCTCT TTGTCTGCAT TATTATATTA AAACAGCACA GGGGCCTGTG
TTAGTGAAGG TGCCGAATGC TGAGTTTCTC TGTTTCTGTG CAACCTCTAG CGTTGATAAG
TTGCTCTCTT CGCCAGGCTT AGGTTATGTG AGAACCAAGG CGCTGACTCT TCAGAACTTT
GAATCCCAGA GTGTGACAGC ACTTTATTGT CAATCACGGC AAAACTATCG GAATTTGACC
CGAGCTGGTG TTGATCTTGG GATCCCACTT TATGAATCTG ATGTTCGTCC TGAACATCGA
TACCTCATTG AACGGTTTAT TGCGCTGGAT GTTGAGTTCT CCGGTGAGTT TATATCAACC
CCGTCAACTG ATGCTTTACC TGTTTTTATG GCTGAGCGTG CTCGTAAAGC TGAGCTGGAT
ATCTCACTTA ATGCTATCTC ATTGGATTTT GAGTGTAGTT TCGACGGAGA GCTTTACTCA
GTGGGCTTAT ATGGGATGAG CGGCGAGCAG CCCTATGAGA AAGTCATTAT GGTCGGGGAT
GCAAGCGCTA TAACACAGAG TGCAACGCCT GAGACAGATG AGAAAAGTAA GGCGGCAGCT
TATGTCGAGT GGGTACAAGA TGAACGAGCA CTCATTCTCG CCTTGGTCGA GTGGTTTAAT
GATTATGATC CCGACATTAT TATCGGTTGG GCCGTGGTTA CCTTTGACCT TGCTCTGCTG
TTTCGCCGAG CTGAAAAGCT AGGGATAAAA TTGCCCATTG GCCGAGGAGG GGAACAGCTT
AGCTGGAAAG TTGCCGATAA ATTCAGGCCT GAATCCCTTT CATTGCCTGG GCGAGTCGTA
TTAGATGGTA TCGATTGGCT TAAAGCTGCA TTTTATCGTT TTGATAGTTT CTCCTTGGAA
TCTGTATCTC GTACCTTGCT CGATGAGGGC AAGGCTATCC ATAGTGTTGA GCACCGTGTC
GATGAGATAG CTCAGTTATT TGCGCATGAT AAGTTAGCGC TTGCACACTA TAACTTGACC
GATAGCAGAC TCGTGTGGGA CATCTTTAAT CATACTGAGT TGTTTGAGTT TGCTATTGAG
CGCTCAAAGC TAACAGGTTT AGAGCTCGGG AGAGTAGGGG CCTCGGTCGC TGCTTTTAAT
AATTTGTATC TACCGCATCT GCATCGTGCA GGTTTTGTAG CGCCAGCCAT GGCGACTAGC
CAAGGGTTAG AGAGTCCAGG TGGTTATGTG ATGGACTCTA TTCCTGGCTT ATACCAAAAT
ATTATTGTGT TGGATTTTAA AAGTCTGTAT CCCTCAATTA TTCGTACCTT TCTTATTGAT
CCTAAGGGGT TAGTGCAAGG CTTGTCTCTG CCAGACTCTG ATACCGTTGC AGGTTTTCGT
GGTGGAAGGT TTAGTCGAGA TAACCCCATA CTTCCTCAAC TCATTAAAAC CTTATCTGAG
CACAGAGAGT TGGCGAAAAA GGAGAGTAAT GCACCGCTGT CTCAGGCCAT TAAGATCATC
ATGAACTCGC TTTATGGGGT ATTAGGTTCA AGAGGTTGTG TATTTCATGA TGCTAGGTTA
GCAAGCTCCA TTACATTAAG GGGCCATGAG ATCATGAAGC AAACTAAGGT TTGGATTGAG
GAGTGCGGAT ATAAGGTTAT CTATGGTGAT ACTGACTCTA CCTTTGTTTG GTTGGGTAAT
GACCCACTTG AGGTCGATGC TGATACCGCC GCTAAAGGCT TAGTGGAGAT GGTGAACACT
CACTGGCGTG AAAGGTTATT AAGCTCAATG AATATTGAGT GTTTCTTGGA GCTTGAATAT
GAGTCCCATT ATGAACAGTT TTTTATGCCC ACATTAAGAG GTTCTACTGA GGGGTCTAAG
AAGCGTTATG TTGGCGCTTA TACTCAGCAA AGTGGCGAGT TGAAATTAGT ATTTAAAGGG
ATGGAGCAAG TGCGAAGTGA TTGGAGTCCA ATTGCAAGGC GAGTTCAAGA GTCACTGTAT
TATCGTCTTT TCTCCAAACA GGATGTGAAG TTGTTTTTGC AGAGTATCGT AGAGGAGTTA
TTGTCAGGAA AGCTTGATTC AGAGCTTATT TTTTCTAAGA AGCTTCGCAG AGATATTAGT
GATTACAAGG CCAAATCTTC ACCACATGTT AAAGCTGCGC AGATCCAATA TGAGTTATCT
GGTAATACGA GCCTCTCTAA AAGAGGGGCG CAAATTGATT ATTTAATGAC AGTAAATGGC
GCTGAACCTG TGGAATACAG AAAATCCAAT ATCGACTATC AATACTATAT CGAGCGGCAA
TTGGGGCCGA TAGCTGATCC CATTCTTACC ATTTTGGGCG AAAGTTTCTC TAGCATGAAC
TCAAATCAGC TTACGTTAAT ATAG
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| Protein sequence | MSREESLPAS VKGRVLSRHL VQQSGALCLH YYIKTAQGPV LVKVPNAEFL CFCATSSVDK
LLSSPGLGYV RTKALTLQNF ESQSVTALYC QSRQNYRNLT RAGVDLGIPL YESDVRPEHR
YLIERFIALD VEFSGEFIST PSTDALPVFM AERARKAELD ISLNAISLDF ECSFDGELYS
VGLYGMSGEQ PYEKVIMVGD ASAITQSATP ETDEKSKAAA YVEWVQDERA LILALVEWFN
DYDPDIIIGW AVVTFDLALL FRRAEKLGIK LPIGRGGEQL SWKVADKFRP ESLSLPGRVV
LDGIDWLKAA FYRFDSFSLE SVSRTLLDEG KAIHSVEHRV DEIAQLFAHD KLALAHYNLT
DSRLVWDIFN HTELFEFAIE RSKLTGLELG RVGASVAAFN NLYLPHLHRA GFVAPAMATS
QGLESPGGYV MDSIPGLYQN IIVLDFKSLY PSIIRTFLID PKGLVQGLSL PDSDTVAGFR
GGRFSRDNPI LPQLIKTLSE HRELAKKESN APLSQAIKII MNSLYGVLGS RGCVFHDARL
ASSITLRGHE IMKQTKVWIE ECGYKVIYGD TDSTFVWLGN DPLEVDADTA AKGLVEMVNT
HWRERLLSSM NIECFLELEY ESHYEQFFMP TLRGSTEGSK KRYVGAYTQQ SGELKLVFKG
MEQVRSDWSP IARRVQESLY YRLFSKQDVK LFLQSIVEEL LSGKLDSELI FSKKLRRDIS
DYKAKSSPHV KAAQIQYELS GNTSLSKRGA QIDYLMTVNG AEPVEYRKSN IDYQYYIERQ
LGPIADPILT ILGESFSSMN SNQLTLI
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