Gene Swoo_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3070 
Symbol 
ID6117385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3762138 
End bp3762674 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content45% 
IMG OID641634612 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001761436 
Protein GI170727410 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000252712 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000932566 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGAAC TCTATACAGA CAGGTTGAGG TTAAGAACAC TCAGGCGTGA TGATATGCAA 
GATTTTTTGA AGGTTCATCA AGATCCTCTG ATAAATCAAT ACATCGCAGT GCCTGAGTCT
GAAACTGTGT TGCTTGAAAA GTTCGAGCAT AAATTAGCGC CTTGGCATTA TGACTCAGGT
GAGTGGTTAA CACTGAGCAT CGAGGAGCTA GGCGCTGATC GCTTTATCGG CTTTACTGGC
CTGTACTGCT CAAACTTAAC ATTAGGGCAT GCCGAAGTGG GTTACATGTT GGCAACGCAA
GGCCAAGGTA AAGGTTATGC CAGCGAAAGC CTGCAAGCTG TTATCGACTG GGCGTGTTTA
CGTTTCGATG TGCATAAGTT TATTGGTACT TGTGCTGCGG ATAACCTTGC TTCGGGGCGA
GTGCTTGAGA AAGCAGGCTT CAAATTAGAA GGTGTGCTCA GGCATAACTT TAAAATTAAG
GAGCAGTGGA TTGATGATAA GGTCTATGGC TTACTAAGCG AAGAAAGATC GCTTTAA
 
Protein sequence
MLELYTDRLR LRTLRRDDMQ DFLKVHQDPL INQYIAVPES ETVLLEKFEH KLAPWHYDSG 
EWLTLSIEEL GADRFIGFTG LYCSNLTLGH AEVGYMLATQ GQGKGYASES LQAVIDWACL
RFDVHKFIGT CAADNLASGR VLEKAGFKLE GVLRHNFKIK EQWIDDKVYG LLSEERSL