| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3066 |
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| Symbol | |
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| ID | 6117381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3758304 |
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| End bp | 3759194 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634608 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001761432 |
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| Protein GI | 170727406 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.249094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00377983 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACACAG AATTTCCGCC ACTGAATGCA CTTCTAGCCT TTGAGTCAGC ATCAAGGCAT
TTGAGTTTTT CGCACGCTGC CGATGAGCTC TTTGTCACCC ATGGCGCCAT AAGTAAGCAG
ATTAAGAGCT TGGAGAGTTA CCTCGGTACT CCGCTTTTTC TTCGCCAACA TAGAAAGTTA
GCGCTCACTG ATGATGCCAA ACGATACCTG CCACAAATTC AGGCTGCTTT GCAGACCATT
AAGACAGCAA CAGATGAGAT AAAATCACAT CAGATGCAAT CACAGACCTT AGCGATTAAT
GTACTACCTA GCCTTACCAT CAACTGGTTG ATCCCGCGTA TGGAGGAGTT TAAACAGCGC
TATCCTCATC TTTATGTTGA TCTCTCTATC GGTGATTTTA CGGTTAATTT TGAGCAGAGC
CGCTGCGATA TCGCCATCAG AAGTGCAACC CAAGCGCCAA AAGAGGTTAA CTACCTTAAA
TTAATGGATG AAGATCTCTG TTTGGTTTGC GCACCATTAC TGATGAAAGA GCTTCACAGC
TTAGATGACA TTAACAAGAT GACGTTACTG AAGCACACAA CCCGCCCTGA ACTTTGGCCC
TATTGGGCAG ACAAGGTCGG TTTGACCTTA ACCACTGAAA AGAAGTTTGG TATGGAGCAC
TTCTACATGC TTAGCCAAGC AGCAGTAAGC GGAATGGGAC TTGCACTCAT TCCACGCTTT
TTTATTGAGA AAGAGCTTGC CGATGGTAGC CTAGTGATCC CCTTTGACGA AGGCTTTACT
AGCCCATATA CCTATTATGT GATCACCCCA AAATCACAGA ATTTGCCTCT TAAAGCACAG
GCTTTTATCG ATTGGTTGTT GGAAATATTC GCTCCTTATC GCAGTGTCTA A
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| Protein sequence | MHTEFPPLNA LLAFESASRH LSFSHAADEL FVTHGAISKQ IKSLESYLGT PLFLRQHRKL
ALTDDAKRYL PQIQAALQTI KTATDEIKSH QMQSQTLAIN VLPSLTINWL IPRMEEFKQR
YPHLYVDLSI GDFTVNFEQS RCDIAIRSAT QAPKEVNYLK LMDEDLCLVC APLLMKELHS
LDDINKMTLL KHTTRPELWP YWADKVGLTL TTEKKFGMEH FYMLSQAAVS GMGLALIPRF
FIEKELADGS LVIPFDEGFT SPYTYYVITP KSQNLPLKAQ AFIDWLLEIF APYRSV
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