| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3057 |
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| Symbol | |
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| ID | 6117372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3742314 |
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| End bp | 3743483 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641634599 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001761423 |
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| Protein GI | 170727397 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0161665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0111828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAG TGCTATTTAA CACTCACGAT CTCGTACTAC TGTTCACCTT ATATCAGTGC
ATTTTATTTG GGCTTTGTCT GCTGACATTT AAGAAAGGCA ATAAGCTCAG CCATCTGTTA
TTAGCGCTAT TTCTATTCAG TTACGCTGCG ATTCCACTCG ATACATTAAT TAACTACGGC
GAAGCATTTC GCAGTTATGC CTTAGAGGTT TCAGTCAATT TATTCTATCT GTTTGGTTAC
GCCTACTGGC TTGAAGCCGT ATTTTTATTA TTCTATGTGC GTTCATTGAT TTATCGTGAT
TTTCGCTTCA AACCTCAGGA CTTGCTATTT TTACTGCCGC TAGTACTGTA TTTTTTCTAC
CACCTAGATA CTTGGTACTG GCTGTCTGAT AATGAAAAAA TGCTGCAGCT ACAACAAAAC
TATGCCGGTA ATGAAGCTAT TTCACAGCGT TTCATTGGCT TAGGACGGGA ATGTTTTCGA
TTGTTTTGTG CAATCTTATG TTTCGTCGAG CTAAGGCGCT ATCAATCAAG GCTGAAAGAT
AATTTTGCAA ACTTAGAAAG CGTCGACTTG AACTGGTTAG CTATCTTAGT GATAGGATTT
CTATTTATTC GTGCTGATGC GATTTTAGTG TCTCTAGCCC TGTTTTCATC ATTTGAGTTT
AACCATCACA TTGACTATGA ATTACTCGGG CTAATTTCCA ATTACACAGT ATTGATTTTG
GTAAGCGTGC TCATCTTCTT CAGTTTACGC TTTCAAACTG GTCTTAGCGG CATTTGGCAA
CAACAGCGAA CCGTCGACTC AGGGGCTAAA TATGAGAAGC AACAACCTGA TGAGTCGAGC
ATCGCGCAGA TCAAAGCTTA CATGCAACAA CACAAACCCT TTCTTAATCC ATTACTCACC
TTAGATAGCC TTGCTTCACA ACTGCAACTT TCCCCGCGGG TGCTATCGCA AATTATCAAT
CGCCACTTCG AACAGAACTT TTTCGAGTTT ATTAATCAAT ATCGCATTAG TGAAAGTCAG
CGCTTGCTTA GCGATGCCGC TCTAAAACAC ACTACGATCA TAGAGATCAT GGATAGATCT
GGCTTCAACA GTAAAGCGAC CTTTAATACT CTATTTAAAA AACGTTTAGG TAAAACCCCG
AGTCAATATA GAAAACAGCA ACTGCAGTAG
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| Protein sequence | MKTVLFNTHD LVLLFTLYQC ILFGLCLLTF KKGNKLSHLL LALFLFSYAA IPLDTLINYG
EAFRSYALEV SVNLFYLFGY AYWLEAVFLL FYVRSLIYRD FRFKPQDLLF LLPLVLYFFY
HLDTWYWLSD NEKMLQLQQN YAGNEAISQR FIGLGRECFR LFCAILCFVE LRRYQSRLKD
NFANLESVDL NWLAILVIGF LFIRADAILV SLALFSSFEF NHHIDYELLG LISNYTVLIL
VSVLIFFSLR FQTGLSGIWQ QQRTVDSGAK YEKQQPDESS IAQIKAYMQQ HKPFLNPLLT
LDSLASQLQL SPRVLSQIIN RHFEQNFFEF INQYRISESQ RLLSDAALKH TTIIEIMDRS
GFNSKATFNT LFKKRLGKTP SQYRKQQLQ
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