| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3052 |
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| Symbol | |
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| ID | 6117367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3738043 |
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| End bp | 3738978 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641634594 |
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| Product | patatin |
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| Protein accession | YP_001761418 |
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| Protein GI | 170727392 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.443611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0107165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGA TTGGGATTGC ATTAGGCAGT GGCGCTGCTA AAGGGTGGGC ACATATTGGT
GTGCTTAACG GATTGGCCGA GATGGGGATT AAACCTGATA AGGTCTCAGG TTGCTCGATT
GGTGCCTTGG TTGGAGCGGC TTATGCGAAC GATCAGCTTG ATGAGCTGGA AACATGGGTA
CGTAGCTTCT CTAGCTGGGA TGTGTTGGGC TTGATGGATC TAAGCTGGCG TAAGGGAGGC
TTGATTGGCG GTGAAAAAGT CTTTGATGTG ATTCAGAGTC GGATAGGCGA TCTTCAGATT
GAGCAGCTGC ATCGCCCCCT TATTGCGGTG GCAACCGATC TCTATTCAGG GCAGGAGATC
TGGTTTAAAG AGGGGGATCT GCGTCATGCT ATTCGCGCTT CTTGTTCCAT GCCTGGCATA
CTGCCGCCGG TGAAGTTAGG CGAACGCTGG TTGGTTGACG GTGCTGTGGT CAATCCTGTG
CCTGTTTCTG TAAGCCGCGC TATGGATGTC GATGTGGTGA TAGCGGTTGA TCTGAATGGT
CAAAAGCGTG GCCGAATGCA GGTGCTACCT GTGGATATGG CTTGCAGTAA ACCGTCGGTC
GAGGAGAGTG TACAAGCGCA GGAACATCAA GATACTGGTT TTATGGATCT GCTGGCGCGG
GGCAGGGATT ATGTCACCAA TTTGACGGAT AAATTCACCT TAGGTAAAGG CTCAAACCCT
GGAATGTTGG CAGTGATGTC TCAGTCTATG GACATACTGG AGCAGCGTCA TAAACGTGCA
AGGTTGATGG GTGACCCACC TGATATCTGC TTGATCCCTG ATGTTGCCGA CATCGGCACG
ATGGAGTTCC ATCGAGCTGA AGAAGCGATC GCGGCAGGAG AGTTAGCCGT TAAGCTTGCA
AGGCATCAGA TTGAAGCAAG GTTAGAAAGT TACTAA
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| Protein sequence | MAKIGIALGS GAAKGWAHIG VLNGLAEMGI KPDKVSGCSI GALVGAAYAN DQLDELETWV
RSFSSWDVLG LMDLSWRKGG LIGGEKVFDV IQSRIGDLQI EQLHRPLIAV ATDLYSGQEI
WFKEGDLRHA IRASCSMPGI LPPVKLGERW LVDGAVVNPV PVSVSRAMDV DVVIAVDLNG
QKRGRMQVLP VDMACSKPSV EESVQAQEHQ DTGFMDLLAR GRDYVTNLTD KFTLGKGSNP
GMLAVMSQSM DILEQRHKRA RLMGDPPDIC LIPDVADIGT MEFHRAEEAI AAGELAVKLA
RHQIEARLES Y
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