| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3046 |
|---|
| Symbol | ribA |
|---|
| ID | 6117361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3732141 |
|---|
| End bp | 3732758 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641634588 |
|---|
| Product | GTP cyclohydrolase II |
|---|
| Protein accession | YP_001761412 |
|---|
| Protein GI | 170727386 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.19934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0855219 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATTA AGTATGTCGC TTCTTCAACG TTACCCACCC CTTGGGGTGT GTTTGATATG
CATGGTTTTG AAGATACAGA GACAGGTAAA GAGCATGTGG CACTCACATT TGGTGTGCTT
GATGCTGAAA CACCAACGTT AGGTCGAATC CATTCTGAGT GCTTAACCGG TGATGCGCTG
TTTAGTTTAC GTTGTGACTG TGGATTTCAG TTACAAACCG CGATGCAGAA CATTGCTGAA
GCGGGACAAG GTTTTATCCT CTATCTTCGT CAAGAGGGGC GTGGCATAGG CTTGTTGAAT
AAGATCCGCG CCTATGAGCT ACAAGACCAA GGGGCAAACA CAGTCGAAGC CAATGAGAAA
CTGGGTTTTG CAGCTGATAT GCGTAAATAC GATATGATCT TACCTATGAT GGAGAAGATC
GGTATTAAGC AGGTAAGCTT AATGACCAAT AATCCACGAA AAGTGAAGGC GATGCAGGAG
CTAGGTATAG AAGTGGTCCA GCGTATTCCT CTGCAAGTTG GTAAAAATCG TTATAACGAA
GCTTATCTGA AGACTAAGTC AACAGAGCTT GGTCATATGA TGTCCGAACA TCACTTTTCA
ACGGATGGTG AGTCATAA
|
|---|
| Protein sequence | MSIKYVASST LPTPWGVFDM HGFEDTETGK EHVALTFGVL DAETPTLGRI HSECLTGDAL
FSLRCDCGFQ LQTAMQNIAE AGQGFILYLR QEGRGIGLLN KIRAYELQDQ GANTVEANEK
LGFAADMRKY DMILPMMEKI GIKQVSLMTN NPRKVKAMQE LGIEVVQRIP LQVGKNRYNE
AYLKTKSTEL GHMMSEHHFS TDGES
|
|---|
| |