| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3044 |
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| Symbol | |
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| ID | 6117359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3729536 |
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| End bp | 3731077 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634586 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001761410 |
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| Protein GI | 170727384 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.439446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0575166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAT CTCAGAGCCT ACTGCGCAAA TCACATTTTC TTGGTACCAA GATACGTAAT
CTAAGAAAAC GTAATCATCT CACCATGGAA GATCTGTCGG CTCGCTGCAT GAGAGTCGAT
CCGGAATCAG CTCCCTCTAT CTCCTACCTC TCCATGATAG AGCGAGGAAA ACGGGTTCCC
AGTGCTGCCA TGATGGCCGT TATCGCGGCG GTATTTCAAA AGGAGGTAGA CTGGTTTTTA
GATGATGTGC CAGAGGTGCA AGCCATCACT CCTGAAAAAG GACGTCGTGG TGGCATAAGC
GGCATGGCAC TAGAGCCTAG CTTTCTCTTT TCTCAGGATA TACTGCAGAT AGCCATCCCA
GAGATGTTGT CACAAACAGG TATTACTGGC AGACAGTTTG CCCATTTACT TATTCGTGCT
CACCAGGAGC ACCATCAAAA TCACTTCCCT GATCTTGAAC GTGCAGCAGA AGAGATAGGC
ATGAAACGTA TGCCACTAGC GGTTGAAGAT CTTATGGATA TCGCCAAAGG AATGGGCTTA
AGCATTAAGT GGATTGATCA GGCGCCCCAA GATGTGATGG ATGAGATGGG GGTCACCTCA
ATGCAGTTGA TCACCTCCTT CTTCGAGCCG CCATCAACCA TCTATGTCAA TAAGCGCCTT
AAGAATGTGC CTATCAGGCT GAAATACGAT CTAGCCGTGC ATATTGGACA CTGTGCACTG
CACAACAAAG ATGGCTTAAA GTCAGTATTA ACCACTGGAA GAAGCCAGAT AAGCGCCTCC
GAAGAGCTGG GAACCCCAGC CTCTTCAACG GTCAATGCCC AAGATATTCT CCATGCTTGG
CGTGATTTCG AATCCAGTTT TTTTGCCGGT GCCCTGCTCT GCCCTAAAGT GCCATTCAGG
CAACTTCTCG ACCGCCATGG TTATGAGATT GATGTTCATA AACGCTTAGG GATCTCAGCT
TCAGTGGCCA TGCGACGCAT GACAGTTGTC TCTCCTTACC CGCACTGGCA CTACTTTGAT
GCTTATGCTC CCGGTAAACT AAAAGCTGTA TATCGCGGTA ATGGTATCCC TCTTCCTTGG
GGAAATATGA GGCAAGTACA AGATCCCTGT CAGCACTGGG CTGTATTTAG AATGATCAAT
GAGCCCACCC AAGGCACATC GGCGCAGATC TCCATTCTCA ACGTGGCAGA TGAGCCAAGA
ATTTACTGCT GTGAATCGAT AAAAGTCGAA GATCTAGCTG GCAACAATCA TGTGCTCTGC
GCCGGTATCG ATCTGAACCC AGCCATCGAA GCACAAGGTG GAGATGCATC CGCCATCGCC
TCAGATCTGA AACAAGCCTG CGTTGATAAA GGTGGCTCTG TGATGATCCC AAGTGCCATT
AGAAGCGATC TGATGAGCGT TGCTAAAATA TTAAATATCA ACTGGATAGA GCGAGGTATA
GAGAACGAAG CCAGATTAAT TTGCTCAAGA GGTGCCGCCT GTCCACGTCA GCCAAGTTGC
TATGCATCCG GAAGAGCTGA GTGTGATGCC GTTACCAACT AA
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| Protein sequence | MSKSQSLLRK SHFLGTKIRN LRKRNHLTME DLSARCMRVD PESAPSISYL SMIERGKRVP
SAAMMAVIAA VFQKEVDWFL DDVPEVQAIT PEKGRRGGIS GMALEPSFLF SQDILQIAIP
EMLSQTGITG RQFAHLLIRA HQEHHQNHFP DLERAAEEIG MKRMPLAVED LMDIAKGMGL
SIKWIDQAPQ DVMDEMGVTS MQLITSFFEP PSTIYVNKRL KNVPIRLKYD LAVHIGHCAL
HNKDGLKSVL TTGRSQISAS EELGTPASST VNAQDILHAW RDFESSFFAG ALLCPKVPFR
QLLDRHGYEI DVHKRLGISA SVAMRRMTVV SPYPHWHYFD AYAPGKLKAV YRGNGIPLPW
GNMRQVQDPC QHWAVFRMIN EPTQGTSAQI SILNVADEPR IYCCESIKVE DLAGNNHVLC
AGIDLNPAIE AQGGDASAIA SDLKQACVDK GGSVMIPSAI RSDLMSVAKI LNINWIERGI
ENEARLICSR GAACPRQPSC YASGRAECDA VTN
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