Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3037 |
Symbol | |
ID | 6117352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3722053 |
End bp | 3723378 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641634579 |
Product | aromatic hydrocarbon degradation membrane protein |
Protein accession | YP_001761403 |
Protein GI | 170727377 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000400429 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0267167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGT ATTTTAACAA GACAATACTA GCTGTAGCGG TAACACTTGC CAGTTCACAA GCAATAGCAG CAGGTTTTCA ACTTAACAGT CAATCAGCAA CAGGCCTTGG CCGAGCTTTT GCCGGCGATG CAGTGATTGC TGATAATGCG TCAGTACTAT CGCGTAATCC AGCAGCAATG GCTCTGTTTG ATGAAAAATC ATTATCGGTT GGCGCGGCGT ATGCCGACTT AGACGTCAAT ATCTCTGACG TGTCAACGCC ACTAGGAAAT TACGGTAGTG CAGAAGGCGT AGCTGAAAGC AAACTTATCC CTAACTTCTA CTACATCCAA CCTATTAACG ATAAATGGGC ATTTGGTGTC GCAGGCTTTA GTAATTTTGG TACTGGTACC GACTTAACTA GCCTTGCTAA TAGCAACCCA ACAATGGACA ACGGCACGGT TGTCCCAGCA CCAGCACCGG TTGATCTATT GGGTAACACT GAAATCGTGA CCATGAATTT CAACGCAAGT TTATCTTACC GCTTCAATGA ACATTTCAGC GTTGGTGCTG GTGTAGATAT CATTTATGGT GAGGGTAACT TAAGCCGTGA GGGTAACCTT CCATTCGACG ATAACGGCAG CATGGTGCCA GTTTCTTTAG TCGATGTCGA AGCTGATGGT ATTGCATTTG GTGGTATTCT TGGTGCCGTT TACGAGTTTA ACGCCGACCA CCGTTTAGGC ATGAGCTACC GTTTCAGCCC AGAGTTTAAA GCGACTGGCG ATGTAAACAT GACACAACCA GGTGTTGGTA CCATCGCATT CGATGAGATC AACATTCCGA TGCCAGATAT CTTCCAAGTT GCTGGCTTTC ATCAACTAAC TGAAAAGTTC GCATTACACT ATACAGCCCA GCTTACCACA TGGGGTGATT TCCATGAGAT CACAGTCACA GATGGTCAGC TAGCAAACGG CACCGCTGCC GGTGATGCAG TACTTAAGCA GTACGCTTGG GAAGATTCTT GGTTATTCAG TGTTGGCGGT ACATACACAA TCAACGAAAA CTGGAAAGTG CGTGCAGGTT ACATGCATGA TCAAGGCGTT GTTGGTGATG TAAGCTCATT ATCTATCCCT GATTCAGACC GAAACTGGTA CACAGCAGGT GTTAGTTATA ACCTAAGCAC ACAATCGACT ATCGATATGG GTATCGCCTT TGTCCGCGGT GAAGATGTTC ATGTTACCGA AAATAGTTCA GTTATCGCAT CAATCCCTGG TTTAAATGGT GATGTGACAG CTTATACTCG CTCTGATGCT ATCTACTACT CAGTGCAGTA CAGCTACCAG TTCTAA
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Protein sequence | MMKYFNKTIL AVAVTLASSQ AIAAGFQLNS QSATGLGRAF AGDAVIADNA SVLSRNPAAM ALFDEKSLSV GAAYADLDVN ISDVSTPLGN YGSAEGVAES KLIPNFYYIQ PINDKWAFGV AGFSNFGTGT DLTSLANSNP TMDNGTVVPA PAPVDLLGNT EIVTMNFNAS LSYRFNEHFS VGAGVDIIYG EGNLSREGNL PFDDNGSMVP VSLVDVEADG IAFGGILGAV YEFNADHRLG MSYRFSPEFK ATGDVNMTQP GVGTIAFDEI NIPMPDIFQV AGFHQLTEKF ALHYTAQLTT WGDFHEITVT DGQLANGTAA GDAVLKQYAW EDSWLFSVGG TYTINENWKV RAGYMHDQGV VGDVSSLSIP DSDRNWYTAG VSYNLSTQST IDMGIAFVRG EDVHVTENSS VIASIPGLNG DVTAYTRSDA IYYSVQYSYQ F
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