Gene Swoo_3035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3035 
Symbol 
ID6117350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3719139 
End bp3719843 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content44% 
IMG OID641634577 
Producthypothetical protein 
Protein accessionYP_001761401 
Protein GI170727375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00530845 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0353116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGC TAAAATTTAG ACGACAAGCC TATGGAGATC CGAACAATCA AGATCCCGAC 
TTTTTAGCAG AGATGCACAG CTCTGTAGAG AAGGAAGCTT TTGTTAATGA TCTAAAAATG
ATGGACAGTA AAATAGAGCG AGCGTTAGAC ATTGATGTCC CTGACGATCT TGCTGCAAAA
CTGCTACTCA ACCAACAGCT TCATCAGCAT CAACAACAGC GAAAGCGTTC AGGTTTCACC
TTAGCCTTAG TCGCTTCGGT AGCCTTTATT GCTGGGATCA CTTTTACCCT ATTGAGAATG
TCGCCAGTCG ATCTCGGTCA ACATGCACTT GCCCATGTTT ATCATGAGAC GAAGGCACTT
CAAGCAGACG ACAATGTCCA GTTTTCCGAT GTTAACTTCC AACTCGCTTC ATTAGGAACC
TTCGGAGATT CAAAATTTAC ACAGCAACCC GGAAAAGTCT ATTACAGCAC CTTCTGCGAT
TTTCAGGGTG TGCAAAGCCT GCATCTCGTC ATGCAGGGAG AGCACAGTAA AGTCACGCTG
TTTATTGTTC CCCTTGAGAA TCGTATGGTA CTTGAGGAAG CTTTTGCCGA TAACAAATAC
AAAGGTAATG GGTTCGTAAC CGATAATGCT TATATGCTAC TCGTCGGCGA AACCAGCGAA
GATGTGAACT TTGTCAAAAA AGAGGTTGAA CAGACCTTTA TCTAA
 
Protein sequence
MDELKFRRQA YGDPNNQDPD FLAEMHSSVE KEAFVNDLKM MDSKIERALD IDVPDDLAAK 
LLLNQQLHQH QQQRKRSGFT LALVASVAFI AGITFTLLRM SPVDLGQHAL AHVYHETKAL
QADDNVQFSD VNFQLASLGT FGDSKFTQQP GKVYYSTFCD FQGVQSLHLV MQGEHSKVTL
FIVPLENRMV LEEAFADNKY KGNGFVTDNA YMLLVGETSE DVNFVKKEVE QTFI