Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3035 |
Symbol | |
ID | 6117350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3719139 |
End bp | 3719843 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641634577 |
Product | hypothetical protein |
Protein accession | YP_001761401 |
Protein GI | 170727375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00530845 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0353116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGAGC TAAAATTTAG ACGACAAGCC TATGGAGATC CGAACAATCA AGATCCCGAC TTTTTAGCAG AGATGCACAG CTCTGTAGAG AAGGAAGCTT TTGTTAATGA TCTAAAAATG ATGGACAGTA AAATAGAGCG AGCGTTAGAC ATTGATGTCC CTGACGATCT TGCTGCAAAA CTGCTACTCA ACCAACAGCT TCATCAGCAT CAACAACAGC GAAAGCGTTC AGGTTTCACC TTAGCCTTAG TCGCTTCGGT AGCCTTTATT GCTGGGATCA CTTTTACCCT ATTGAGAATG TCGCCAGTCG ATCTCGGTCA ACATGCACTT GCCCATGTTT ATCATGAGAC GAAGGCACTT CAAGCAGACG ACAATGTCCA GTTTTCCGAT GTTAACTTCC AACTCGCTTC ATTAGGAACC TTCGGAGATT CAAAATTTAC ACAGCAACCC GGAAAAGTCT ATTACAGCAC CTTCTGCGAT TTTCAGGGTG TGCAAAGCCT GCATCTCGTC ATGCAGGGAG AGCACAGTAA AGTCACGCTG TTTATTGTTC CCCTTGAGAA TCGTATGGTA CTTGAGGAAG CTTTTGCCGA TAACAAATAC AAAGGTAATG GGTTCGTAAC CGATAATGCT TATATGCTAC TCGTCGGCGA AACCAGCGAA GATGTGAACT TTGTCAAAAA AGAGGTTGAA CAGACCTTTA TCTAA
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Protein sequence | MDELKFRRQA YGDPNNQDPD FLAEMHSSVE KEAFVNDLKM MDSKIERALD IDVPDDLAAK LLLNQQLHQH QQQRKRSGFT LALVASVAFI AGITFTLLRM SPVDLGQHAL AHVYHETKAL QADDNVQFSD VNFQLASLGT FGDSKFTQQP GKVYYSTFCD FQGVQSLHLV MQGEHSKVTL FIVPLENRMV LEEAFADNKY KGNGFVTDNA YMLLVGETSE DVNFVKKEVE QTFI
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