| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3032 |
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| Symbol | |
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| ID | 6117347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3714784 |
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| End bp | 3716736 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634574 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001761398 |
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| Protein GI | 170727372 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.198571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0885065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCACT TCTTACGTCC AGAGTGGTTT TTAGCTCTGC TCCCTTTGCT TATAATTCTG
ATATTAATCT GGAAAGCTGA GCGAGTAAAC TCCACTTGGA GCCGCTATAT CTCTCCTCAT
TTAGCTAACT TTTTAGTCTC AAAAAGTCAG CAAGTTAAAC GCAGCAACCT TAGCTATTTA
GCAGCGTCTT GGTTTATCGC CGTACTTGCC CTTTCAGGGC CCGCCATCTC AAAACAGTCA
CTGCCAGTAT TTGAAGCCGC ACAGGGACGA GTGATTCTGA TGGATATGTC CCTCTCTATG
TACGCTACCG ATCAGGCCCC CAACAGACTG ACACAAGCCA AGTTTAAAGC CACCGATCTG
ATTGAAGCAT TAACTGAGGG GGAAACTGGA CTTATCGCCT ATGCTGGCGA TGCGTTTACC
ATTAGCCCGC TTACACGGGA TCGAGCAACA CTGCTGAATC TACTGCCAAC ACTCTCACCA
CAAATAATGC CTGTTAGAGG CTCTAACCTG CCTGCTGCAC TTGAGCAAGG AAAAAGTTTA
CTGGTGCAAG GTGGACATAT TCAAGGCGAC ATTATTTTGC TCGCAGATGG TGTCAGCCCA
AGTCAGATGA ATGCAGCTAA AAAAGTATTA AAGGGAACTC AATACCGCCT TTCAATCTTA
GTATTTGGCA GTGAACAAGG CTCACCAATT CGTCTTCCTG ACGGTCAGTT GCTACGTGAT
AATAGCAACC AAGTGGTTGT TGTCAAAACC GATTACTCGT TGCTCAATGA ATTAGTTCAA
AACGCCGATG GTGTACTTGT CCCCTTTCGC AGCGATGGCG CAGATCTTGA GCAGTTAACT
CAGTGGCTAA ACACCAGCAG TGATGACACT AAAGCCACCG ATCTTAATGG CGAAGCTTGG
CAAGATGCTG GCCCCTATAT CGCACTATTA TTGCTACTGC CGGTTCTACT TAGCTTCAGA
CATGGATTAA TTGCATCACT ACTTGTAATG ACCATCTACC AGCCCTCCCC CGTCATGGCT
TCGACTTGGG ATGACCTATG GAAGACTAAA AACCAACAGG GGATGCAAGC CTATCAAGCT
GAAGATTACG GCAATGCATC GACGACTTTT ACCGATCCTC AATGGCAAGC CAGTGCACAC
TATAAAGCAG GTAAATATGA TGAAGCGCTG AGCTTGTTTG AACAAGATAG CAGTGCATCA
GGGCTCTATA ACCAAGGCAA TAGCTTAATG CAGAAAGGTG AATTTGAGCA GGCGGCGCAG
CGTTACAGCA AAGCACTGGA ACTCGACCCC AAGCTTGAAG GGGCTAATGA GAACCTTGAA
CTTGCCAAAA AATTAGAGCA AGAAAAACGA GAAAGCCCTG AAAAATCTGA TAATAGTGAT
AATGGTGATA ATGGTGACAA ATCAGAGCAA GGTGAGGAAG GCGATCAACA AGATAAGCAA
TCCGATCAGA GTGACTCAGA ACAAGGTAAA GATCAGGAGC AAAAGCAACA AGGTCAAAAC
GGTGAGCAGG ACAATCAAGA GCAGCAAGGC GATCAACAAC AAAACTCAGA GCAGTCTGAC
TCACAGCACA ATGAGCAGCA ATCATCGAAA GATAATGATG CACAGATGCA AGCCGACCCT
AACGAGCAGC AGCAAACCGC TGATGACAAT GATAAAAATC AACAAGCTCA AAGCAATGAT
GAGAAAGCTG CAGCTAAAGA TGAGGAGAGT AAAGAGGAGC AAACGGCTCA AGCTCAAGCA
ATGCAGCAGG AACAAAATGA GCAACAAGGT GAACAACAAC AAACCCAAGC GGCACAAGCG
GTAACAGGCC CTGAAGAACT ACCACCAGAG ATGGAGCGCG CAATGCGCGC CTTAGTCGAT
GATCCTCAAG TTTTACTCAG AAACAAGATG CAACTTGAAT ATCAAAAGCG TCGTATGCAA
GGCCTAGCAT CTAAGGAGCA GGAACAGTGG TAA
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| Protein sequence | MLHFLRPEWF LALLPLLIIL ILIWKAERVN STWSRYISPH LANFLVSKSQ QVKRSNLSYL
AASWFIAVLA LSGPAISKQS LPVFEAAQGR VILMDMSLSM YATDQAPNRL TQAKFKATDL
IEALTEGETG LIAYAGDAFT ISPLTRDRAT LLNLLPTLSP QIMPVRGSNL PAALEQGKSL
LVQGGHIQGD IILLADGVSP SQMNAAKKVL KGTQYRLSIL VFGSEQGSPI RLPDGQLLRD
NSNQVVVVKT DYSLLNELVQ NADGVLVPFR SDGADLEQLT QWLNTSSDDT KATDLNGEAW
QDAGPYIALL LLLPVLLSFR HGLIASLLVM TIYQPSPVMA STWDDLWKTK NQQGMQAYQA
EDYGNASTTF TDPQWQASAH YKAGKYDEAL SLFEQDSSAS GLYNQGNSLM QKGEFEQAAQ
RYSKALELDP KLEGANENLE LAKKLEQEKR ESPEKSDNSD NGDNGDKSEQ GEEGDQQDKQ
SDQSDSEQGK DQEQKQQGQN GEQDNQEQQG DQQQNSEQSD SQHNEQQSSK DNDAQMQADP
NEQQQTADDN DKNQQAQSND EKAAAKDEES KEEQTAQAQA MQQEQNEQQG EQQQTQAAQA
VTGPEELPPE MERAMRALVD DPQVLLRNKM QLEYQKRRMQ GLASKEQEQW
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