| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3027 |
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| Symbol | fadI |
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| ID | 6117342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3709649 |
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| End bp | 3710959 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634569 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_001761393 |
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| Protein GI | 170727367 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.193952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.160809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGACA GACAACAGGT AACGAACGCA AAGGGCGATC GTATTGCAAT AGTAACTGGG
TTGAGAACCC CTTTTGCTAA GCAAGCCACC GCATTCCACG GTGTATCAGC ATTAGATATG
GGCAAGATGG TTGTCAATGA GCTGCTTTCA CGTTCAGAGC TTGACCCGAA AGAGATACAG
CAACTGGTTT ATGGCCAGGT GGTTCAGATG CCGGCTGCGC CAAATATTGC CCGTGAGATT
GTGTTAGGCA CTGGCATGGA TATCGCCACT GACGCATACA GTGTGACACG AGCTTGTGCG
ACCAGTTTTC AATCTACTGT CAATGTGGCT GAATCTATCA TGACTGGTAA TATTGATATC
GGTATTGCTG GTGGTTCTGA TTCATCATCT GTTTTGCCAA TTGGCGTGTC AAAGAAGCTA
GCTCATGGGT TGGTAGATCT TAATAAAGCG CGCTCATTTG GTCAAAAACT GGCCATCTTC
CGCCGTCTTG GATTGAAAGA CCTGCTACCT GTGCCCCCTG CTGTTGCTGA ATATTCAACA
GGATTGTCGA TGGGACAAAC TGCAGAGCAG ATGGCAAAAA CTTATAATAT TAGTCGCGCC
GACCAAGATG CACTTGCCCA CCGTTCTCAC TCTCTTGCGA CTGAAACTTG GAACAGTGGG
AATTTGGCTC AAGAGGTGAT GACAGCCCAT GTGCCACCTT ATAAAGCTTT TATTGATCGT
GATAATAATA TTCGCGAAAA CTCCTCTATC GAATCTTATG CCAAGTTAAG ACCTGCCTTT
GACCGCAAAC ACGGCACAGT TACAGCTGCG ACAAGTACAC CTTTGACAGA TGGCGCATCT
GCCATTCTAT TGATGAGTGA AAGCCGCGCT AAGGCGCTAG GTTATAACCC GATTGGTTAC
ATCAAAAGCT ACGCGTTTAG TGCCATAGAT GTATGGGAAG ATATGTTGAT GGGGCCATCT
TATGCGACAC CGATAGCACT TAAACGTGCA GGGATGGAAC TTGAAGATCT GACATTGATT
GAGATGCATG AAGCATTTGC CGCTCAAGCT CTTGCCAATA TGAAGATGTT TGCTTCAAAG
AAGTTCGCAC AGGAGAAGTT AGGTCGTAAC CGTGCTATTG GCGAGATAGA TATGAACAAA
TTTAATGTGT TGGGTGGCTC CCTTGCTTAT GGTCATCCGT TTGCTGCGAC AGGAGCGAGA
TTGATAACCC AGGTGTGTAA CGAGCTTAAA CGTCGCGGCG GTGGTACAGG ACTGACGACC
GCATGTGCAG CGGGTGGTTT AGGTGCGGCA ATGATAGTTG AAGTGGAGTA A
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| Protein sequence | MSDRQQVTNA KGDRIAIVTG LRTPFAKQAT AFHGVSALDM GKMVVNELLS RSELDPKEIQ
QLVYGQVVQM PAAPNIAREI VLGTGMDIAT DAYSVTRACA TSFQSTVNVA ESIMTGNIDI
GIAGGSDSSS VLPIGVSKKL AHGLVDLNKA RSFGQKLAIF RRLGLKDLLP VPPAVAEYST
GLSMGQTAEQ MAKTYNISRA DQDALAHRSH SLATETWNSG NLAQEVMTAH VPPYKAFIDR
DNNIRENSSI ESYAKLRPAF DRKHGTVTAA TSTPLTDGAS AILLMSESRA KALGYNPIGY
IKSYAFSAID VWEDMLMGPS YATPIALKRA GMELEDLTLI EMHEAFAAQA LANMKMFASK
KFAQEKLGRN RAIGEIDMNK FNVLGGSLAY GHPFAATGAR LITQVCNELK RRGGGTGLTT
ACAAGGLGAA MIVEVE
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