Gene Swoo_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3019 
Symbol 
ID6117334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3697331 
End bp3697855 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content45% 
IMG OID641634561 
Producthypothetical protein 
Protein accessionYP_001761385 
Protein GI170727359 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.862772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.739494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG ATACCGAAGA TGCAGATCTG TTTTCTACCT TAACGGAAGG GATCAAACCT 
TTTAAGCAGA ATAAACGTCA CTTCACTGCA CCACAAAAAG ACAAGAAGCA GCTTGAAGAG
AAAGAGCAGC AGCTTCATGC CGACAGTTAT TTTTCAGATA CGTATCAGCC ACACCTCCCC
AGTGAAGGTG CCATGCGTTG GAATCGTGAT GATATAGACA GTTTCGAGGT TAAGCGTCTT
AGGCGAGGAG ATTATCAGCC AGATCTATTA CTGGATCTAC ATGGAATGCG ACAATCGGAA
GCCAAACTCG AACTGGCAGC CCTAATCCAA GCCTGTATAA AGCAACAGAT ACATTGCTGT
TGTGTGATGC ATGGACACGG TACGGGAATT TTAAAACAGA ATATTCCCAT GTGGCTAGCT
CAGCACCCCC ATGTAATGGC TTTTCATAAG GCCCCCAAAG AGTGGGGAGG CGATGCAGCT
TTACTGGTGT TAATTGATAT TGGCGATCAG CCCTACAGAA GGTAA
 
Protein sequence
MKKDTEDADL FSTLTEGIKP FKQNKRHFTA PQKDKKQLEE KEQQLHADSY FSDTYQPHLP 
SEGAMRWNRD DIDSFEVKRL RRGDYQPDLL LDLHGMRQSE AKLELAALIQ ACIKQQIHCC
CVMHGHGTGI LKQNIPMWLA QHPHVMAFHK APKEWGGDAA LLVLIDIGDQ PYRR