Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3004 |
Symbol | |
ID | 6117319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3679179 |
End bp | 3679970 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641634546 |
Product | DSBA oxidoreductase |
Protein accession | YP_001761370 |
Protein GI | 170727344 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1651] Protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.159469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATTTT CAAATAAAAC AGTGAGTAAA TATAAGATAA AAATGATATC AGCTATCGCA ACTGCGTTGC TGATTAGTCT AGTTCAGATC TCTTGGGTAA ACTTAGCTCA CGCTGAGCTT GAGAGCTTAA CTGCGCAGCA GCAAGCGGAT GTCAAAGCAA TTATTAAAGA TGCCTTAATC AATGATCCTG AGCTGTTAAA AGAGGCGATT ATTGCACTGC AAACCCGTGA GCAGCAGGGG GCTGATGCCG CCAGGCAGAG CGCCTTGAAC AGTCACAAAC AGGCCCTGTT TGAGACCAAA ACAGATCCCT GGAAAGGTGC GTCAGATCCT GAAATTACTA TGGTTTACTT TACCGATTTT AACTGCCCTT ACTGTAAAAA ATTGGAGCCA TCACTGGATA AGCTAGTTAA GGAATTTCCT CAATTAAAGA TCATTATCAA GATGGTCCCA CTGCAGGGAG AAGCATCTGA AGAGGCTGTC GCTTTAGCGC AAACGGTTTG GCTTAATGAG CCTAGCAAAT ACCTAAAGTT AAAAGAGGTA TTGATGTCTA GCCCACGTAA GCTTGATTCT GAATCAATCG CTAAAGTCGC CAAGCTAACC GGCACTGAGA TATGGCTGAA TAATACAGAT AAAACCGTTA ATCAGCAGGT GAAAGATAAT GTTAACTTGA TGATGGCCCT TGGCCTTAGA GGCACTCCTG CGATGATTTT TGGGGATAAA GTGATACCAG GCTTGGTCAC TTATGAGGTG CTTAAAGAGC AACTTGAAGA GGCGATAGAG GCACAGGAGT AA
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Protein sequence | MLFSNKTVSK YKIKMISAIA TALLISLVQI SWVNLAHAEL ESLTAQQQAD VKAIIKDALI NDPELLKEAI IALQTREQQG ADAARQSALN SHKQALFETK TDPWKGASDP EITMVYFTDF NCPYCKKLEP SLDKLVKEFP QLKIIIKMVP LQGEASEEAV ALAQTVWLNE PSKYLKLKEV LMSSPRKLDS ESIAKVAKLT GTEIWLNNTD KTVNQQVKDN VNLMMALGLR GTPAMIFGDK VIPGLVTYEV LKEQLEEAIE AQE
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