Gene Swoo_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3004 
Symbol 
ID6117319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3679179 
End bp3679970 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content43% 
IMG OID641634546 
ProductDSBA oxidoreductase 
Protein accessionYP_001761370 
Protein GI170727344 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.159469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATTTT CAAATAAAAC AGTGAGTAAA TATAAGATAA AAATGATATC AGCTATCGCA 
ACTGCGTTGC TGATTAGTCT AGTTCAGATC TCTTGGGTAA ACTTAGCTCA CGCTGAGCTT
GAGAGCTTAA CTGCGCAGCA GCAAGCGGAT GTCAAAGCAA TTATTAAAGA TGCCTTAATC
AATGATCCTG AGCTGTTAAA AGAGGCGATT ATTGCACTGC AAACCCGTGA GCAGCAGGGG
GCTGATGCCG CCAGGCAGAG CGCCTTGAAC AGTCACAAAC AGGCCCTGTT TGAGACCAAA
ACAGATCCCT GGAAAGGTGC GTCAGATCCT GAAATTACTA TGGTTTACTT TACCGATTTT
AACTGCCCTT ACTGTAAAAA ATTGGAGCCA TCACTGGATA AGCTAGTTAA GGAATTTCCT
CAATTAAAGA TCATTATCAA GATGGTCCCA CTGCAGGGAG AAGCATCTGA AGAGGCTGTC
GCTTTAGCGC AAACGGTTTG GCTTAATGAG CCTAGCAAAT ACCTAAAGTT AAAAGAGGTA
TTGATGTCTA GCCCACGTAA GCTTGATTCT GAATCAATCG CTAAAGTCGC CAAGCTAACC
GGCACTGAGA TATGGCTGAA TAATACAGAT AAAACCGTTA ATCAGCAGGT GAAAGATAAT
GTTAACTTGA TGATGGCCCT TGGCCTTAGA GGCACTCCTG CGATGATTTT TGGGGATAAA
GTGATACCAG GCTTGGTCAC TTATGAGGTG CTTAAAGAGC AACTTGAAGA GGCGATAGAG
GCACAGGAGT AA
 
Protein sequence
MLFSNKTVSK YKIKMISAIA TALLISLVQI SWVNLAHAEL ESLTAQQQAD VKAIIKDALI 
NDPELLKEAI IALQTREQQG ADAARQSALN SHKQALFETK TDPWKGASDP EITMVYFTDF
NCPYCKKLEP SLDKLVKEFP QLKIIIKMVP LQGEASEEAV ALAQTVWLNE PSKYLKLKEV
LMSSPRKLDS ESIAKVAKLT GTEIWLNNTD KTVNQQVKDN VNLMMALGLR GTPAMIFGDK
VIPGLVTYEV LKEQLEEAIE AQE