| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2997 |
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| Symbol | |
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| ID | 6117312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3673077 |
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| End bp | 3673829 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641634539 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001761363 |
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| Protein GI | 170727337 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.665573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATTGC AAGAAGATAG CGAGCACTTT CTAAATATTA AACAGGTTTC TGATGTGTAC
CATATGTTTA GCTCATCCTC ATCTTCTGAT GAGATGATGC TATGCGTTAA AGCATTACAG
AATTTGTTAG AGGTCGATGG GGTTGCGTTA ATCAACCTTA TTCTTCGTCC TGATCATACA
ATCACCATTG AAAGGGTTGT CAGTTCAGGT TTTGGTTTTG AGAGTAAAAG TGTGGAGTGG
GATAATATAT ACCAGAAGAA AAAGTTTCAG TATATTGACC CCGTTGTGAG CTGCTCTGCA
TCCTTCAGAC GATCTTTTAA TTGGGCATCA GTGCCTTCGA TGATCACTCT GTCAGAGGTT
CAGTTTAACT TTCTTGAACG GGCACAAGAG ATGGGGTTAA AAGAGGGAGC GAGCATAGGA
TCTTTTTCAA CTCGGCAGAT ATATAAAGAG TTGACTATCA CATCTGTGTG CGGCTGCTCT
TTAAACCCTG AGCAGCTGGC AAGCTTAGAG TTAATTAATG CTGTTTCAGC ACAGGCAATG
AAACGCTTAA TACTTCCTGC CGAGAAGTTG ACCGGAAGGG AGAGTGAGAT ACTGGCGTGG
TCATCTGAAG GTAAGTCTTC ATGGGAAATA GGCATGATCT GCTCAATCAC AGAAAGAACT
GTAAAATTTC ATTTGAAGAA TATTTATAAA AAATTAAATG TGCAGAATAG AGCTCAGGCG
ATTGTTTGTG CTATTAGATT AGGGCTGATT TAA
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| Protein sequence | MRLQEDSEHF LNIKQVSDVY HMFSSSSSSD EMMLCVKALQ NLLEVDGVAL INLILRPDHT
ITIERVVSSG FGFESKSVEW DNIYQKKKFQ YIDPVVSCSA SFRRSFNWAS VPSMITLSEV
QFNFLERAQE MGLKEGASIG SFSTRQIYKE LTITSVCGCS LNPEQLASLE LINAVSAQAM
KRLILPAEKL TGRESEILAW SSEGKSSWEI GMICSITERT VKFHLKNIYK KLNVQNRAQA
IVCAIRLGLI
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