| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2994 |
|---|
| Symbol | |
|---|
| ID | 6117309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 3669310 |
|---|
| End bp | 3670560 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641634536 |
|---|
| Product | BNR repeat-containing protein |
|---|
| Protein accession | YP_001761360 |
|---|
| Protein GI | 170727334 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.949051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.143837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAC TCCCCATGAT TAAAGTTAAT CACTTAATAG TATTGCTAAT TATCTGCATC
CCCTTGAAGT TCACCGACGT TAAAGCAGCT CATGAACATC ACAAGATGCA ATCTCAAACG
GACGGTAGGA TCACGTGTAC TCAGCAAGAG ATAAACTGCG CTAAGACGGT GACTTCATCA
TTCGCCCCCA ATGGTGATTT GTGGCGTTTG TGGGCTCACA AAGACAGCAT GTACTTTCAA
ACTTCCCAGA ATAAGGGCGT CACATTTTCC AGTATAAGAC GAGTTCCGAT CCCTAAAGAG
AGCATATCGG CACGTAATGA AAACCGTCCC AAAATCGCCT TTGACCAGTA TCAAGGGGTA
TATCTATCAT GGGCGATGCC AAAAGCCAAA AAATACACCG CAGATGTACG TTTTTCCTAT
TCCAAGGATT ACGGAGCCAG CTTTAGCAGA CCCGTAACCG TCAATAACGA CAAGCTTGAA
ATCGGCCATA GTTTTAATGA GATGCAAGTT ACCGCTGAAG GTGAGATCAC CTTAGTGTGG
CTTGATTCAC GTTTAGCCCA CCAAGCTAGA GCACAGGGAG AGCAAACTAA TGGCTCATCC
TTGTACCTTG GCAGGGCGAA CTACCGCAAG CAGCAACTAA CTTTCTCTAA TCGACCATTA
GCCAACAACA CTTGCGTATG TTGTCGTATT GCTATGGATA TCAATAAACT TGGGGAAACC
GTAATTCTAT GGCGGCATAT TTATAACGAT AATATTCGCG AATTTGCATT ACTGACCCTT
GAGCAAGATG AAAAAACTCA ACATCCCCCG TACCAAATCA GTCATGATCG CTGGCAAATT
GATGGTTGCC CACATCAAGG TGGCGGGCTC AGTATTGATA GCAGCAACCG CTACCATATG
GTGTGGTTTA ACCAAGGAGA ACTAGGGAAA GGGATTTTTT ATGCATCAAG CCTAGATCAG
GGCCAATCTT TAACCAAACC TGTGAGTATT GGCCAACAGT CGGCCCAAGC CGCGCATCCC
CATGTCAATA CGCTTGGCAG TAGGGTCGAC ATAGTCTGGA CCCAATTCAA TGGCACAGAA
CACCAACTCT GGCATCAATA CTCCGATAAC AATGGTCAAT CATTTAGCCA AGCACGCTTA
TTAACCACAG CATCAGCAGG CGCTGACCGA CCATTTATTA TCACCAATAA CAACATCAGC
TTTGTTTCTT GGCATCGATT GAAACAAGGC CACTGGATAC AAGCATTATG A
|
|---|
| Protein sequence | MVKLPMIKVN HLIVLLIICI PLKFTDVKAA HEHHKMQSQT DGRITCTQQE INCAKTVTSS
FAPNGDLWRL WAHKDSMYFQ TSQNKGVTFS SIRRVPIPKE SISARNENRP KIAFDQYQGV
YLSWAMPKAK KYTADVRFSY SKDYGASFSR PVTVNNDKLE IGHSFNEMQV TAEGEITLVW
LDSRLAHQAR AQGEQTNGSS LYLGRANYRK QQLTFSNRPL ANNTCVCCRI AMDINKLGET
VILWRHIYND NIREFALLTL EQDEKTQHPP YQISHDRWQI DGCPHQGGGL SIDSSNRYHM
VWFNQGELGK GIFYASSLDQ GQSLTKPVSI GQQSAQAAHP HVNTLGSRVD IVWTQFNGTE
HQLWHQYSDN NGQSFSQARL LTTASAGADR PFIITNNNIS FVSWHRLKQG HWIQAL
|
|---|
| |