| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2987 |
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| Symbol | |
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| ID | 6117302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3660122 |
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| End bp | 3661285 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641634529 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase catalytic region |
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| Protein accession | YP_001761353 |
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| Protein GI | 170727327 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0258728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.362905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATCA TAGCCGATGA AAACATGCCT TATGTACAAG AGCTGTTTGG GGACTTAGGG
ATCATTGAAA CGGTAAATGG CCGTAGCCTA ACAGCTGAAA TGGTAAAAGA TGCTGATGTA
TTGCTGGTAC GCTCGGTGAC CCAAGTCGAT GCATCATTAC TATCAAAGAA TAGTCAGTTA
ACCTTTGTGG GTAGTGCAAC AATAGGGACT GATCATATCG ATACTGAGTA TCTGACTCAG
CGTCAGATCT CCTTTTCAAA TGCCCCTGGC TGCAATGCAA CGGCGGTAGG CGAGTTTGCC
TTTATCGCCA TGTTGGAGTT GGCCAATCGA TTTGGAACAA GCCTGAAAGA CAAAGTGGTG
GGGATTGTCG GTGCTGGTAA TACTGGGAGT GCGGTGGCCA GATGTTTACA AGCTTACGGC
GTTGAAGTGC TATTACATGA TCCCTTGATT GAAAAAAGCG ATCCTCGCAA TTTTGTTTCG
TTAGATGAGC TTATCACTCG CGCAAACGTT ATCAGCCTAC ATGTGCCTAT CACTAAGAGT
GGTGAACATA AAACTTGGTA TCTGTTTGAC GAGAGTAGAC TAAATAGCCT TAATGCTGAC
ACTTGGTTAT TGAACTGCTG TCGGGGCGAG GTGGTAGATA ACCGTGCTTT GATAAACGTT
AAACAGCAAA GAGCAGATAT TAAAGTGGTG CTTGATGTAT GGGAGGGGGA ACCGAATCCG
ATGCGTGAAC TGATCCCCTA TGTGGAGTTT GCTACGCCCC ATATTGCAGG TTATAGCTTA
GAGGGAAAAG CGCGGGGCAC CTATATGCTT TATCAGAAGT TGATGCAGGT GTTGGGTAAA
AAGGAGGAGA AAGAGATGCT GGCACTTTTA CCCTCTTTTT GGACCGAGCA GCTGACACTG
ACCAAGGAGC CTTCTGAAAA AGCGCTATTA CAGCTTAGTC GCTTTGTTTA TGACCTTCGT
GATGATGATG CGTTATTTAG AGCTACTTTG CTTGAAGATC CATCAAAAAA AGCCCCTGTT
AATTCCTCTA ATAACAATGG GTTTGACCTT ATGAGAAAAA ATCACAAGCA TAGACGTGAA
TTTAGCGCGT TAACGCTAGC AACTACGGGT CAATCTGAGG TAGATTGGTT GCTTAATTTA
GGATATTCAG GAGTCGGTCG GTAA
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| Protein sequence | MKIIADENMP YVQELFGDLG IIETVNGRSL TAEMVKDADV LLVRSVTQVD ASLLSKNSQL
TFVGSATIGT DHIDTEYLTQ RQISFSNAPG CNATAVGEFA FIAMLELANR FGTSLKDKVV
GIVGAGNTGS AVARCLQAYG VEVLLHDPLI EKSDPRNFVS LDELITRANV ISLHVPITKS
GEHKTWYLFD ESRLNSLNAD TWLLNCCRGE VVDNRALINV KQQRADIKVV LDVWEGEPNP
MRELIPYVEF ATPHIAGYSL EGKARGTYML YQKLMQVLGK KEEKEMLALL PSFWTEQLTL
TKEPSEKALL QLSRFVYDLR DDDALFRATL LEDPSKKAPV NSSNNNGFDL MRKNHKHRRE
FSALTLATTG QSEVDWLLNL GYSGVGR
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