| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2986 |
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| Symbol | |
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| ID | 6117301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3659103 |
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| End bp | 3660119 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634528 |
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| Product | aspartate-semialdehyde dehydrogenase |
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| Protein accession | YP_001761352 |
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| Protein GI | 170727326 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000971394 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.367426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCAAG AATTTAATGT TGTCGTATTA GGTGCTACGG GTGCTGTGGG TCAAACTATG
ATTGAGATCC TCGAAGAGCG CAATTTTCCC GTTGCGAATT TATTCCCTCT TGCCAGCAGT
CGTAGTGCTG GTAATACGGT AAGCTTCCAC GGTAAACAGG TAGAAATTCT TGATGTCGAT
AAGTTTGACT GGTCTCAGGC TCAGATAGGC TTTTTCTCTG CTGGTGGCGA TGTCTCGGCT
AAATGGGCAC CGATTGCTGC AGAGCATGGT TGTGTTGTTA TCGACAACAC CTCTCATTTT
AGATATGACA TCGATGTACC GCTTGTAGTT CCTGAAGTGA ACCCTCAAGC TATTGCCGAT
TTCCGTAATC GAAATATTAT CGCTAACCCG AACTGCTCTA CGATTCAGAT GTTGGTGGCC
CTTAAGCCGA TATATGATGC ATTTGGGATC TCACGTATCA ATGTGGCGAC TTACCAGTCT
GTTTCAGGCT CAGGTAAGCA AGCAATAGAA GAGTTGGCGA GTCAGTGTGC CAAGTTGCTT
CAGGGCTTAC CCATTGAACC AAAGGCTTAT CCTAAGCAGA TAGCCTTTAA TGCGCTGCCT
CATATCGACA AGTTTATGGA TAATGGTTAT ACGAAAGAGG AGATGAAGAT GGTCTGGGAA
ACCCAGAAAA TCTTCGGCGA TGAAAGCATA GTTGTTAACC CAACTGCTGT TCGTGTTCCT
GTTTTCCATG GTCATTCAGA AGCGATACAT TTAGAGACTC TGCAACCAGT TGACGCCGAA
GATGTTAAGT CTGTGTTGCG AGATGCGCCG GGTGTTGAAC TGTTTGAATC AGATGAAGAG
TATCCAACCG TGGTGACCGA TGCTGCTGGG TGTGATCCAG TTTATGTGGG ACGTGTACGT
AAAGACATCT CACATGAAAA TGGCATTAAC CTGTGGGTTG TCTCTGATAA TATTAGAAAA
GGTGCTGCGC TTAATAGCAT ACAGATAGCC GAAGTATTAA TAAGAGATTA TTACTAG
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| Protein sequence | MSQEFNVVVL GATGAVGQTM IEILEERNFP VANLFPLASS RSAGNTVSFH GKQVEILDVD
KFDWSQAQIG FFSAGGDVSA KWAPIAAEHG CVVIDNTSHF RYDIDVPLVV PEVNPQAIAD
FRNRNIIANP NCSTIQMLVA LKPIYDAFGI SRINVATYQS VSGSGKQAIE ELASQCAKLL
QGLPIEPKAY PKQIAFNALP HIDKFMDNGY TKEEMKMVWE TQKIFGDESI VVNPTAVRVP
VFHGHSEAIH LETLQPVDAE DVKSVLRDAP GVELFESDEE YPTVVTDAAG CDPVYVGRVR
KDISHENGIN LWVVSDNIRK GAALNSIQIA EVLIRDYY
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